Resource

Id Histone_ChIP-seq/ENCSR881ZMPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR881ZMP [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR881ZMP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:25.774681+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR881ZMP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 12 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR881ZMP float

Histone_ChIP-seq_ENCSR881ZMP
Histone_ChIP-seq ENCSR881ZMP [biosample_summary="Homo sapiens BLaER1 12 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR881ZMP [1.5, 16.4]
n
263,401,710
mean
5.58
sd
2.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2634017108.19% 129968
chr1 25275589 10.15% 11845
chr2 21575924 8.91% 10896
chr3 16920637 8.53% 8655
chr4 11483478 6.04% 6467
chr5 14613353 8.05% 7281
chr6 11629190 6.81% 6749
chr7 12814711 8.04% 7006
chr8 12857322 8.86% 5896
chr9 11139194 8.05% 5463
chr10 12315410 9.20% 6183
chr11 11997719 8.88% 5580
chr12 13919877 10.44% 6624
chr13 6408691 5.60% 3382
chr14 8467712 7.91% 4336
chr15 9559670 9.37% 4502
chr16 9979359 11.05% 4487
chr17 13229605 15.89% 5934
chr18 5348517 6.65% 2840
chr19 13106098 22.36% 4954
chr20 7160171 11.11% 3219
chr21 3208130 6.87% 1528
chr22 5565405 10.95% 2518
chrX 4825948 3.09% 3623
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129968 203 72409 2026.67 1011
global segment-length histogram

Files

Filename Size md5
ENCFF336PYT.bed.gz 2.97 MB 6c27e665f5e043d5b8e13af601a936cd
ENCFF336PYT.tabix.bed.gz 1.33 MB 098d989ff61593da0fb0093d9b9b40b9
ENCFF336PYT.tabix.bed.gz.tbi 153.13 KB 7556e0fe5b88b0a8c04af1dd209b95db
genomic_resource.yaml 2.32 KB 1122ec010997499b7306e84e01a179a0
statistics/