Resource

Id Histone_ChIP-seq/ENCSR878KIYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR878KIY [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR878KIY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001211/
  • biosample_summary: Homo sapiens Peyer's patch tissue female adult (53 years)
  • date_created: 2016-10-19T23:15:20.760531+00:00
  • date_released: 2016-11-02
  • doi: 10.17989/ENCSR878KIY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR878KIY float

Histone_ChIP-seq_ENCSR878KIY
Histone_ChIP-seq ENCSR878KIY [biosample_summary="Homo sapiens Peyer''s patch tissue female adult (53 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR878KIY [1.56, 49]
n
44,675,170
mean
19.4
sd
10.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 446751701.39% 30779
chr1 4543762 1.83% 3154
chr2 3069606 1.27% 2156
chr3 2439175 1.23% 1657
chr4 1774877 0.93% 1202
chr5 2022475 1.11% 1370
chr6 2538875 1.49% 1746
chr7 2215748 1.39% 1513
chr8 1616822 1.11% 1136
chr9 1890503 1.37% 1308
chr10 1897751 1.42% 1325
chr11 2473524 1.83% 1624
chr12 2303747 1.73% 1513
chr13 902905 0.79% 632
chr14 1462079 1.37% 1001
chr15 1441491 1.41% 1012
chr16 1805658 2.00% 1254
chr17 2727299 3.28% 1815
chr18 743222 0.92% 539
chr19 2852896 4.87% 2010
chr20 1180716 1.83% 819
chr21 461401 0.99% 350
chr22 1064171 2.09% 734
chrX 1246467 0.80% 909
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30779 198 13346 1451.48 1131
global segment-length histogram

Files

Filename Size md5
ENCFF450AWP.bed.gz 822.82 KB c87c0eb1087c51df0b09497a61a2bb09
ENCFF450AWP.tabix.bed.gz 355.52 KB 5dbb803b6b5f62a91d5183312881f359
ENCFF450AWP.tabix.bed.gz.tbi 175.6 KB dec01998cefe62a2a07bc1e4ca0d5042
genomic_resource.yaml 1.74 KB cc8d27955824956a25f8deea41f5246b
statistics/