Resource

Id Histone_ChIP-seq/ENCSR877PAScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR877PAS [biosample_summary="Homo sapiens small intestine tissue female adult (30 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR877PAS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002108/
  • biosample_summary: Homo sapiens small intestine tissue female adult (30 years)
  • date_created: 2015-10-01T07:16:00.202404+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR877PAS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (30 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR877PAS float

Histone_ChIP-seq_ENCSR877PAS
Histone_ChIP-seq ENCSR877PAS [biosample_summary="Homo sapiens small intestine tissue female adult (30 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR877PAS [1.96, 8.3]
n
2,823,177
mean
4.27
sd
0.962

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 28231770.09% 6544
chr1 213728 0.09% 542
chr2 226016 0.09% 529
chr3 111841 0.06% 275
chr4 128844 0.07% 291
chr5 153763 0.08% 330
chr6 127781 0.07% 320
chr7 143127 0.09% 335
chr8 115382 0.08% 253
chr9 130244 0.09% 297
chr10 176093 0.13% 367
chr11 123760 0.09% 292
chr12 110959 0.08% 259
chr13 71475 0.06% 158
chr14 93228 0.09% 202
chr15 95228 0.09% 210
chr16 109673 0.12% 241
chr17 138809 0.17% 332
chr18 54034 0.07% 114
chr19 148316 0.25% 318
chr20 132611 0.21% 274
chr21 26733 0.06% 61
chr22 78333 0.15% 157
chrX 113199 0.07% 387
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 6544 190 3646 431.41 348
global segment-length histogram

Files

Filename Size md5
ENCFF265QBV.bed.gz 125.64 KB 271a18453b45b2b4f7f0b86cb623604c
ENCFF265QBV.tabix.bed.gz 66.63 KB 78a437b9b382b684fc574d6eff6369cc
ENCFF265QBV.tabix.bed.gz.tbi 45.05 KB 8e5d0957099b132b1b9eff14dfcd23c0
genomic_resource.yaml 2.23 KB 3f67a9affc82877ebefbafde1e0b33aa
statistics/