Resource

Id Histone_ChIP-seq/ENCSR877OGWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR877OGW [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR877OGW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years)
  • date_created: 2021-08-25T18:07:26.927892+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR877OGW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (83 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR877OGW float

Histone_ChIP-seq_ENCSR877OGW
Histone_ChIP-seq ENCSR877OGW [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR877OGW [1.83, 49.8]
n
53,404,666
mean
19.3
sd
10.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 534046661.66% 32044
chr1 5201668 2.09% 3114
chr2 3705520 1.53% 2210
chr3 3145799 1.59% 1773
chr4 2175008 1.14% 1274
chr5 2670652 1.47% 1529
chr6 3110530 1.82% 1850
chr7 2578005 1.62% 1615
chr8 2094981 1.44% 1246
chr9 2210166 1.60% 1383
chr10 2313350 1.73% 1405
chr11 2886218 2.14% 1644
chr12 2803026 2.10% 1639
chr13 1261248 1.10% 800
chr14 1717444 1.60% 1013
chr15 1648560 1.62% 1014
chr16 2050318 2.27% 1274
chr17 2947828 3.54% 1737
chr18 1016251 1.26% 620
chr19 3231813 5.51% 2022
chr20 1363547 2.12% 829
chr21 549507 1.18% 352
chr22 1185166 2.33% 737
chrX 1490361 0.96% 936
chrY 47700 0.08% 28
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32044 215 32202 1666.6 1271
global segment-length histogram

Files

Filename Size md5
ENCFF344TGW.bed.gz 816.29 KB 1486d56c421f9dda5b9d6dbd765c43ca
ENCFF344TGW.tabix.bed.gz 362.81 KB 27d4d31840cb1d27be737403820fc594
ENCFF344TGW.tabix.bed.gz.tbi 186.07 KB 90fff3c3e60ab4d87261daf5d0f89fe2
genomic_resource.yaml 1.56 KB e82b839a9c16623455ae0ba63b8b5e30
statistics/