Resource

Id Histone_ChIP-seq/ENCSR875PYXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR875PYX [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR875PYX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years)
  • date_created: 2021-04-30T04:18:14.731863+00:00
  • date_released: 2022-01-06
  • doi: 10.17989/ENCSR875PYX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (83 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR875PYX float

Histone_ChIP-seq_ENCSR875PYX
Histone_ChIP-seq ENCSR875PYX [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (83 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR875PYX [1.86, 45.9]
n
46,854,872
mean
19.3
sd
9.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 468548721.46% 28774
chr1 4562534 1.83% 2781
chr2 3244329 1.34% 1951
chr3 2776670 1.40% 1609
chr4 1930220 1.01% 1126
chr5 2373309 1.31% 1383
chr6 2697249 1.58% 1623
chr7 2245841 1.41% 1453
chr8 1870198 1.29% 1110
chr9 1908511 1.38% 1208
chr10 2046600 1.53% 1243
chr11 2524526 1.87% 1485
chr12 2504947 1.88% 1492
chr13 1088494 0.95% 662
chr14 1520066 1.42% 912
chr15 1466095 1.44% 902
chr16 1784968 1.98% 1146
chr17 2565458 3.08% 1592
chr18 886396 1.10% 566
chr19 2806550 4.79% 1865
chr20 1206210 1.87% 773
chr21 449963 0.96% 294
chr22 1040998 2.05% 668
chrX 1309448 0.84% 904
chrY 45292 0.08% 26
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28774 205 18747 1628.38 1319
global segment-length histogram

Files

Filename Size md5
ENCFF009ORT.bed.gz 706.15 KB 8f89a5b38d52644200cb92633544a526
ENCFF009ORT.tabix.bed.gz 320.99 KB 201f1151c242fa6af863063bdfdb46d6
ENCFF009ORT.tabix.bed.gz.tbi 173.36 KB e4c03ad4c90033a7f331f9cc04be2c6a
genomic_resource.yaml 1.56 KB ed45b5e91e195e74d32eda830a0e1eb6
statistics/