Resource

Id Histone_ChIP-seq/ENCSR875OQJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR875OQJ [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR875OQJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue male adult (60 years)
  • date_created: 2020-05-01T02:34:13.075334+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR875OQJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR875OQJ float

Histone_ChIP-seq_ENCSR875OQJ
Histone_ChIP-seq ENCSR875OQJ [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR875OQJ [1.65, 61.7]
n
100,175,738
mean
10.3
sd
8.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1001757383.11% 67566
chr1 9951833 4.00% 6518
chr2 7785942 3.21% 5329
chr3 6604955 3.33% 4555
chr4 3758656 1.98% 2739
chr5 4839526 2.67% 3332
chr6 5552931 3.25% 3762
chr7 4500728 2.82% 3176
chr8 3822097 2.63% 2802
chr9 4403271 3.18% 2997
chr10 4997474 3.74% 3389
chr11 5271001 3.90% 3478
chr12 5343071 4.01% 3480
chr13 2215361 1.94% 1567
chr14 3238227 3.03% 2146
chr15 3589390 3.52% 2396
chr16 3863606 4.28% 2567
chr17 5805791 6.97% 3575
chr18 1815612 2.26% 1374
chr19 4461226 7.61% 2800
chr20 2820351 4.38% 1837
chr21 1175850 2.52% 863
chr22 2473849 4.87% 1516
chrX 1837637 1.18% 1338
chrY 47353 0.08% 30
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 67566 230 26479 1482.64 1072
global segment-length histogram

Files

Filename Size md5
ENCFF014OZD.bed.gz 1.65 MB 0ab113dd240d7ba1b96211da65aab210
ENCFF014OZD.tabix.bed.gz 745.46 KB 31fbe9256b523f6e006366b132322197
ENCFF014OZD.tabix.bed.gz.tbi 233.12 KB 358a9cce559428fae83cf09dd1293afc
genomic_resource.yaml 1.75 KB 6441af1a3c2f14c668e01ca0969bcc03
statistics/