Resource

Id Histone_ChIP-seq/ENCSR867UKCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR867UKC [biosample_summary="Homo sapiens Karpas-422" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR867UKC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005719/
  • biosample_summary: Homo sapiens Karpas-422
  • date_created: 2014-02-20T05:42:00.479500+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR867UKC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR867UKC float

Histone_ChIP-seq_ENCSR867UKC
Histone_ChIP-seq ENCSR867UKC [biosample_summary="Homo sapiens Karpas-422" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR867UKC [1.4, 12.9]
n
97,785,634
mean
3.86
sd
1.13

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 977856343.04% 116050
chr1 9205060 3.70% 10991
chr2 8679891 3.58% 9868
chr3 7451313 3.76% 8703
chr4 4298887 2.26% 5063
chr5 5730865 3.16% 6698
chr6 4853954 2.84% 5770
chr7 4628283 2.90% 5764
chr8 3951029 2.72% 4748
chr9 3841429 2.78% 4571
chr10 3903361 2.92% 4715
chr11 4673021 3.46% 5080
chr12 5315450 3.99% 6609
chr13 2516229 2.20% 3012
chr14 4584810 4.28% 4973
chr15 3757301 3.68% 4592
chr16 2986277 3.31% 3674
chr17 4101425 4.93% 5301
chr18 2196011 2.73% 2580
chr19 4732409 8.07% 5039
chr20 2365630 3.67% 2865
chr21 952317 2.04% 1110
chr22 1522721 3.00% 2045
chrX 1537961 0.99% 2279
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 116050 195 20320 842.62 621
global segment-length histogram

Files

Filename Size md5
ENCFF704MGI.bed.gz 2.57 MB fecc5052d658f31983bcf4f54af07cca
ENCFF704MGI.tabix.bed.gz 1.17 MB cd038489806509f5aa76a81182c1fff5
ENCFF704MGI.tabix.bed.gz.tbi 145.78 KB e371828f76b78879ea0bcf2dcff45723
genomic_resource.yaml 2.12 KB e157ef35bc7d613261527089502b2c25
statistics/