Resource

Id Histone_ChIP-seq/ENCSR860GPMcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR860GPM [biosample_summary="Homo sapiens sigmoid colon tissue male adult (54 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR860GPM
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue male adult (54 years)
  • date_created: 2017-12-06T21:15:28.499108+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR860GPM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR860GPM float

Histone_ChIP-seq_ENCSR860GPM
Histone_ChIP-seq ENCSR860GPM [biosample_summary="Homo sapiens sigmoid colon tissue male adult (54 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR860GPM [1.24, 10.3]
n
24,284,423
mean
4.66
sd
1.57

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 242844230.75% 15133
chr1 2533098 1.02% 1648
chr2 1410171 0.58% 825
chr3 768737 0.39% 476
chr4 808812 0.43% 466
chr5 1123328 0.62% 676
chr6 1361848 0.80% 814
chr7 1196289 0.75% 701
chr8 924184 0.64% 598
chr9 1127465 0.81% 649
chr10 1084654 0.81% 665
chr11 1168315 0.86% 748
chr12 1225043 0.92% 779
chr13 523586 0.46% 301
chr14 708560 0.66% 418
chr15 646448 0.63% 406
chr16 1106227 1.22% 721
chr17 1595202 1.92% 970
chr18 323350 0.40% 211
chr19 2162743 3.69% 1297
chr20 1158020 1.80% 790
chr21 325065 0.70% 228
chr22 832479 1.64% 626
chrM 4464 26.94% 1
chrX 164321 0.11% 116
chrY 2014 <0.01% 3
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 15133 245 73569 1604.73 1001
global segment-length histogram

Files

Filename Size md5
ENCFF977XUO.bed.gz 311.04 KB bc3f13e4668132501f818fa210a009f4
ENCFF977XUO.tabix.bed.gz 157.04 KB 060059ae818dbcd839ed9e7748becf5e
ENCFF977XUO.tabix.bed.gz.tbi 66.32 KB b2e5e41050c29f40d99be1ef9dd0869e
genomic_resource.yaml 1.51 KB 0fb967b07be6eec4c4050faaeb9c06d2
statistics/