Resource

Id Histone_ChIP-seq/ENCSR859MXQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR859MXQ [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR859MXQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (53 years)
  • date_created: 2017-01-24T04:34:20.839349+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR859MXQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR859MXQ float

Histone_ChIP-seq_ENCSR859MXQ

Histone_ChIP-seq ENCSR859MXQ [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K27me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR859MXQ [1.87, 5.47]
n
246,506
mean
3.2
sd
0.468

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2465060.01% 1499
chr1 22598 0.01% 136
chr2 26705 0.01% 142
chr3 6923 <0.01% 49
chr4 14577 0.01% 90
chr5 8395 <0.01% 57
chr6 14953 0.01% 93
chr7 11534 0.01% 71
chr8 11289 0.01% 68
chr9 11358 0.01% 68
chr10 13442 0.01% 78
chr11 11475 0.01% 70
chr12 9040 0.01% 57
chr13 5902 0.01% 35
chr14 7057 0.01% 44
chr15 6914 0.01% 41
chr16 7349 0.01% 50
chr17 13881 0.02% 84
chr18 4937 0.01% 33
chr19 14739 0.03% 77
chr20 6974 0.01% 43
chr21 2219 <0.01% 15
chr22 3653 0.01% 21
chrX 10488 0.01% 76
chrY 104 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1499 95 617 164.45 144
global segment-length histogram

Files

Filename Size md5
ENCFF257HFC.bed.gz 25.48 KB 7d239eae7061a22496b0ea53664d3032
ENCFF257HFC.tabix.bed.gz 14.65 KB bd1abb235271757137dbdb27c2a95015
ENCFF257HFC.tabix.bed.gz.tbi 18.95 KB 15c20093c4c97a5ce376573d416d41c3
genomic_resource.yaml 1.55 KB 1f9a519482d5e8949e7e75bcbc41dc24
statistics/