Resource

Id Histone_ChIP-seq/ENCSR858ASKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR858ASK [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR858ASK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:06:48.678813+00:00
  • date_released: 2022-02-04
  • doi: 10.17989/ENCSR858ASK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR858ASK float

Histone_ChIP-seq_ENCSR858ASK
Histone_ChIP-seq ENCSR858ASK [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR858ASK [1.32, 6.85]
n
3,667,640
mean
3.6
sd
0.71

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 36676400.11% 7983
chr1 211840 0.09% 454
chr2 224311 0.09% 433
chr3 111628 0.06% 248
chr4 154569 0.08% 300
chr5 177682 0.10% 340
chr6 349657 0.20% 693
chr7 230528 0.14% 402
chr8 84456 0.06% 174
chr9 79807 0.06% 160
chr10 168509 0.13% 323
chr11 73806 0.05% 159
chr12 150063 0.11% 309
chr13 89961 0.08% 196
chr14 108152 0.10% 211
chr15 98089 0.10% 219
chr16 67457 0.07% 156
chr17 178285 0.21% 321
chr18 54833 0.07% 112
chr19 51148 0.09% 132
chr20 56435 0.09% 138
chr21 47273 0.10% 104
chr22 16526 0.03% 46
chrX 882625 0.57% 2353
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 7983 165 5908 459.43 371
global segment-length histogram

Files

Filename Size md5
ENCFF783ARL.bed.gz 140.18 KB dffda2af709869574812987bca3aaba6
ENCFF783ARL.tabix.bed.gz 76.74 KB 5017d7cf1c570a2148a5025a44b1cab2
ENCFF783ARL.tabix.bed.gz.tbi 52.19 KB 518a01bdde40c0b09b7a3ab584dc8fea
genomic_resource.yaml 1.75 KB 148022c94a29cf3d96d904a68bde9cba
statistics/