Resource

Id Histone_ChIP-seq/ENCSR855XNQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR855XNQ [biosample_summary="Homo sapiens thyroid gland tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR855XNQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue female adult (53 years)
  • date_created: 2016-10-19T23:17:44.762020+00:00
  • date_released: 2016-11-07
  • doi: 10.17989/ENCSR855XNQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR855XNQ float

Histone_ChIP-seq_ENCSR855XNQ
Histone_ChIP-seq ENCSR855XNQ [biosample_summary="Homo sapiens thyroid gland tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR855XNQ [1.53, 11.4]
n
76,186,072
mean
3.44
sd
0.948

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 761860722.37% 32785
chr1 7737289 3.11% 3216
chr1_KI270711v1_random 1385 3.28% 1
chr2 5441732 2.25% 2509
chr3 4422498 2.23% 2044
chr4 2674955 1.41% 1396
chr5 3459756 1.91% 1593
chr6 3444053 2.02% 1547
chr7 3318934 2.08% 1471
chr8 2705813 1.86% 1223
chr9 3198921 2.31% 1325
chr10 3224303 2.41% 1417
chr11 4117539 3.05% 1738
chr12 4432233 3.33% 1747
chr13 1370247 1.20% 706
chr14 2783884 2.60% 1239
chr15 2816159 2.76% 1254
chr16 3807488 4.21% 1463
chr17 4689747 5.63% 1825
chr18 1056730 1.31% 535
chr19 5378152 9.17% 1954
chr20 2418245 3.75% 1014
chr21 823837 1.76% 379
chr22 2131629 4.19% 790
chrUn_GL000219v1 5763 3.22% 5
chrX 724780 0.46% 394
3341 contigs with no values (186083092 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 32785 535 40465 2323.81 1659
global segment-length histogram

Files

Filename Size md5
ENCFF747CPR.bed.gz 733.9 KB d4d22e7a63b3747e9380a8b0c26b4529
ENCFF747CPR.tabix.bed.gz 358.14 KB 01b4f79307dad829c3f21eb03cb10ebf
ENCFF747CPR.tabix.bed.gz.tbi 104.56 KB 124219df9729be1425f283eb35a92c6f
genomic_resource.yaml 1.52 KB fda6e9c638b6eb8a9c501e4f0aa06b16
statistics/