Resource

Id Histone_ChIP-seq/ENCSR855JPUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR855JPU [biosample_summary="Homo sapiens spinal cord tissue female embryo (108 days)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR855JPU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002240/
  • biosample_summary: Homo sapiens spinal cord tissue female embryo (108 days)
  • date_created: 2015-09-16T21:42:55.324861+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR855JPU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (108 days)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR855JPU float

Histone_ChIP-seq_ENCSR855JPU
Histone_ChIP-seq ENCSR855JPU [biosample_summary="Homo sapiens spinal cord tissue female embryo (108 days)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR855JPU [1.93, 35.3]
n
28,802,602
mean
9.66
sd
6.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 288026020.90% 46422
chr1 2551803 1.02% 4014
chr2 1807138 0.75% 2564
chr3 1001178 0.50% 1617
chr4 1117807 0.59% 1499
chr5 1510078 0.83% 2140
chr6 1912869 1.12% 2446
chr7 1208129 0.76% 1660
chr8 1064434 0.73% 1643
chr9 1151548 0.83% 1699
chr10 1411009 1.05% 2019
chr11 1433543 1.06% 2250
chr12 1142852 0.86% 1681
chr13 545150 0.48% 740
chr14 886502 0.83% 1200
chr15 777889 0.76% 1191
chr16 1044323 1.16% 1609
chr17 1505472 1.81% 2184
chr18 434635 0.54% 687
chr19 1300317 2.22% 1981
chr20 984289 1.53% 1609
chr21 275313 0.59% 378
chr22 439154 0.86% 831
chrX 3297170 2.11% 8780
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46422 175 30251 620.45 346
global segment-length histogram

Files

Filename Size md5
ENCFF470ARP.bed.gz 850.99 KB cb9ec72738bb44c41c57fe9db6172074
ENCFF470ARP.tabix.bed.gz 437.36 KB e20a6f264b1d5b60f8bd6d1933102a53
ENCFF470ARP.tabix.bed.gz.tbi 132.02 KB 634773460c000ee65b5a03491a2c50b5
genomic_resource.yaml 2.22 KB db6d8d92d7725850f836dd0168a2139f
statistics/