Resource

Id Histone_ChIP-seq/ENCSR854OXFcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR854OXF [biosample_summary="Homo sapiens heart left ventricle tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR854OXF
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (53 years)
  • date_created: 2016-10-19T23:13:09.880787+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR854OXF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR854OXF float

Histone_ChIP-seq_ENCSR854OXF
Histone_ChIP-seq ENCSR854OXF [biosample_summary="Homo sapiens heart left ventricle tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR854OXF [1.48, 84.6]
n
123,295,630
mean
16.1
sd
13.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1232956303.83% 70422
chr1 12443646 5.00% 6852
chr2 9357200 3.86% 5457
chr3 8391841 4.23% 4761
chr4 5262619 2.77% 3139
chr5 6029430 3.32% 3661
chr6 6107493 3.58% 3750
chr7 5596888 3.51% 3422
chr8 4826989 3.33% 2967
chr9 5851716 4.23% 3204
chr10 7352264 5.50% 4031
chr11 6412011 4.75% 3515
chr12 6845706 5.14% 3691
chr13 2836106 2.48% 1672
chr14 4190912 3.92% 2238
chr15 4178142 4.10% 2457
chr16 4372372 4.84% 2486
chr17 6310917 7.58% 3322
chr18 2289658 2.85% 1481
chr19 4834180 8.25% 2504
chr20 3388839 5.26% 1923
chr21 1289897 2.76% 836
chr22 2977995 5.86% 1568
chrM 13854 83.61% 5
chrX 2134568 1.37% 1479
chrY 387 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70422 230 135672 1750.81 1115
global segment-length histogram

Files

Filename Size md5
ENCFF546TJN.bed.gz 1.69 MB 75f4474974df8c6b595242cb17a8cec9
ENCFF546TJN.tabix.bed.gz 774.26 KB a11b6bd8cc612e271f3add32032c352f
ENCFF546TJN.tabix.bed.gz.tbi 224.46 KB e360c50290e1fa1e8dc802711ef7c1ad
genomic_resource.yaml 1.54 KB 1dfaa0d36eee4c4705381fd2bb214d83
statistics/