Resource

Id Histone_ChIP-seq/ENCSR852VZGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR852VZG [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR852VZG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:55.639982+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR852VZG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR852VZG float

Histone_ChIP-seq_ENCSR852VZG
Histone_ChIP-seq ENCSR852VZG [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR852VZG [1.82, 10.6]
n
24,118,233
mean
4.34
sd
1.59

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 241182330.75% 35224
chr1 1199984 0.48% 1537
chr2 1188242 0.49% 1353
chr3 450761 0.23% 569
chr4 676670 0.36% 702
chr5 920952 0.51% 1063
chr6 1251798 0.73% 1292
chr7 958315 0.60% 960
chr8 654206 0.45% 853
chr9 547187 0.40% 639
chr10 987913 0.74% 1293
chr11 613759 0.45% 839
chr12 820093 0.62% 1006
chr13 384220 0.34% 450
chr14 768505 0.72% 1041
chr15 596275 0.58% 856
chr16 673107 0.75% 1007
chr17 1047517 1.26% 1192
chr18 307884 0.38% 419
chr19 686803 1.17% 970
chr20 576252 0.89% 791
chr21 261791 0.56% 369
chr22 259305 0.51% 415
chrX 8286694 5.31% 15608
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 35224 200 42320 684.71 459.5
global segment-length histogram

Files

Filename Size md5
ENCFF589YOZ.bed.gz 608.03 KB 70d848b8322b67fa156f720393a294ef
ENCFF589YOZ.tabix.bed.gz 327.56 KB e729ca860dcdbf424273866d83a429e9
ENCFF589YOZ.tabix.bed.gz.tbi 122.01 KB a5a5fbeae0dcd114e8dfc6a8ed2d89e8
genomic_resource.yaml 1.78 KB 2de0b8b5897ee8bccd4fe6553491ddbe
statistics/