Resource

Id Histone_ChIP-seq/ENCSR849NQEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR849NQE [biosample_summary="Homo sapiens endocrine pancreas tissue male" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR849NQE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue male
  • date_created: 2015-09-15T19:51:43.078301+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR849NQE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR849NQE float

Histone_ChIP-seq_ENCSR849NQE
Histone_ChIP-seq ENCSR849NQE [biosample_summary="Homo sapiens endocrine pancreas tissue male" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR849NQE [1.7, 13.8]
n
4,037,748
mean
4.65
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 40377480.13% 13594
chr1 269530 0.11% 1005
chr2 249842 0.10% 926
chr3 193281 0.10% 731
chr4 193985 0.10% 695
chr5 302059 0.17% 1007
chr6 146508 0.09% 580
chr7 194839 0.12% 736
chr8 164619 0.11% 623
chr9 166318 0.12% 549
chr10 180090 0.13% 658
chr11 112669 0.08% 443
chr12 213875 0.16% 671
chr13 82231 0.07% 322
chr14 95000 0.09% 362
chr15 130602 0.13% 411
chr16 144191 0.16% 490
chr17 72834 0.09% 272
chr18 63098 0.08% 250
chr19 913625 1.56% 2306
chr20 58385 0.09% 237
chr21 46881 0.10% 146
chr22 24352 0.05% 99
chrX 13290 0.01% 53
chrY 5644 0.01% 22
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13594 140 4476 297.02 230
global segment-length histogram

Files

Filename Size md5
ENCFF589ONH.bed.gz 232.95 KB 5255b210e8e3717435b1fe532ad8aa91
ENCFF589ONH.tabix.bed.gz 127.7 KB f8c0ec28cdfcce2ec5b2560404374205
ENCFF589ONH.tabix.bed.gz.tbi 76.09 KB ea2d50cb1001938d5cd1127d1f9ee6e0
genomic_resource.yaml 1.44 KB e601c8908ad0868a5c4531efa49b78d5
statistics/