Resource

Id Histone_ChIP-seq/ENCSR849APHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR849APH [biosample_summary="Homo sapiens PC-3" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR849APH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002074/
  • biosample_summary: Homo sapiens PC-3
  • date_created: 2014-02-20T05:23:45.356128+00:00
  • date_released: 2016-05-03
  • doi: 10.17989/ENCSR849APH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR849APH float

Histone_ChIP-seq_ENCSR849APH
Histone_ChIP-seq ENCSR849APH [biosample_summary="Homo sapiens PC-3" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR849APH [1.35, 14.5]
n
77,134,086
mean
3.79
sd
1.24

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 771340862.40% 100139
chr1 9285061 3.73% 11677
chr2 6735576 2.78% 9212
chr3 5678311 2.86% 7667
chr4 2108776 1.11% 2992
chr5 3751494 2.07% 4768
chr6 2724465 1.60% 3789
chr7 3292588 2.07% 4618
chr8 4193780 2.89% 4854
chr9 1851456 1.34% 2604
chr10 3318076 2.48% 4056
chr11 4479790 3.32% 5730
chr12 4900696 3.68% 6413
chr13 1037912 0.91% 1560
chr14 3129015 2.92% 4167
chr15 2554089 2.50% 3504
chr16 1554618 1.72% 2173
chr17 3957506 4.75% 5078
chr18 1347805 1.68% 1885
chr19 4696043 8.01% 5032
chr20 2905872 4.51% 3462
chr21 1269044 2.72% 1606
chr22 832121 1.64% 1182
chrX 1529992 0.98% 2110
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100139 150 20879 770.27 557
global segment-length histogram

Files

Filename Size md5
ENCFF390LQT.bed.gz 2.17 MB ddd75bc92c503f1a8b228f1e82da5282
ENCFF390LQT.tabix.bed.gz 1018.42 KB b5fb37b25ea763569ed8435969fa8933
ENCFF390LQT.tabix.bed.gz.tbi 160.93 KB 0ef58365c96348493b97394cd0480429
genomic_resource.yaml 2.09 KB 360a8282d9608c8ff8f302262dfed96c
statistics/