Resource

Id Histone_ChIP-seq/ENCSR848DUNcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR848DUN [biosample_summary="Homo sapiens H1" and target="H2BK120ac"]
Description
Labels
  • accession: ENCSR848DUN
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0003042/
  • biosample_summary: Homo sapiens H1
  • date_created: 2015-10-01T07:15:51.602226+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR848DUN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H2BK120ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR848DUN float

Histone_ChIP-seq_ENCSR848DUN
Histone_ChIP-seq ENCSR848DUN [biosample_summary="Homo sapiens H1" and target="H2BK120ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR848DUN [1.63, 13.8]
n
11,672,734
mean
3.66
sd
1.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 116727340.36% 45048
chr1 1100332 0.44% 4210
chr1_KI270712v1_random 346 0.20% 1
chr1_KI270713v1_random 141 0.35% 1
chr2 930607 0.38% 3588
chr3 745263 0.38% 2987
chr4 637690 0.34% 2526
chr5 685483 0.38% 2642
chr6 745825 0.44% 2880
chr7 648227 0.41% 2449
chr8 575065 0.40% 2195
chr9 482060 0.35% 1858
chr9_KI270718v1_random 289 0.76% 2
chr10 623474 0.47% 2335
chr11 524943 0.39% 2031
chr12 588926 0.44% 2263
chr13 354789 0.31% 1343
chr14 345894 0.32% 1332
chr15 337102 0.33% 1260
chr16 363678 0.40% 1407
chr17 432992 0.52% 1688
chr18 275813 0.34% 1092
chr19 301734 0.51% 1225
chr20 323165 0.50% 1197
chr21 137771 0.29% 526
chr22 215177 0.42% 815
chr22_KI270733v1_random 431 0.24% 1
chrUn_KI270442v1 241 0.06% 1
chrX 274280 0.18% 1115
chrY 20996 0.04% 78
3337 contigs with no values (128250410 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45048 125 2681 259.12 210
global segment-length histogram

Files

Filename Size md5
ENCFF808BIC.bed.gz 909.69 KB 89c663bf98809e8d576485ea50a9d83b
ENCFF808BIC.tabix.bed.gz 450.42 KB b743f8843740df7a964786382c62026d
ENCFF808BIC.tabix.bed.gz.tbi 184.32 KB 52d6612fd083dde3d2cb17002b7d5090
genomic_resource.yaml 1.86 KB c22c7eccd13d11bd5d95f1a0fbe8350f
statistics/