Resource

Id Histone_ChIP-seq/ENCSR847FTJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR847FTJ [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR847FTJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (41 years)
  • date_created: 2020-05-01T02:22:54.999528+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR847FTJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR847FTJ float

Histone_ChIP-seq_ENCSR847FTJ
Histone_ChIP-seq ENCSR847FTJ [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR847FTJ [1.82, 5.56]
n
2,818,288
mean
3.14
sd
0.497

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 28182880.09% 6233
chr1 268046 0.11% 607
chr2 192812 0.08% 443
chr3 148718 0.07% 332
chr4 78894 0.04% 187
chr5 115284 0.06% 273
chr6 104949 0.06% 229
chr7 121276 0.08% 278
chr8 63807 0.04% 149
chr9 131464 0.09% 288
chr10 121519 0.09% 269
chr11 149794 0.11% 332
chr12 195870 0.15% 400
chr13 38821 0.03% 98
chr14 93890 0.09% 205
chr15 97012 0.10% 221
chr16 140126 0.16% 317
chr17 175936 0.21% 404
chr18 35097 0.04% 76
chr19 321358 0.55% 626
chr20 86179 0.13% 187
chr21 22464 0.05% 56
chr22 95604 0.19% 209
chrX 19368 0.01% 47
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 6233 195 3548 452.16 390
global segment-length histogram

Files

Filename Size md5
ENCFF456HUQ.bed.gz 111.15 KB dc365874d28f884f788f44b84f22345a
ENCFF456HUQ.tabix.bed.gz 61.31 KB 1ecaa6add068a950b983268f09633562
ENCFF456HUQ.tabix.bed.gz.tbi 45.64 KB 76b86df1df02ec978f946964d5e98465
genomic_resource.yaml 1.71 KB 22b89d8d91253ece8caf36534e1a0e8e
statistics/