Resource

Id Histone_ChIP-seq/ENCSR843UEZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR843UEZ [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR843UEZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue male adult (37 years)
  • date_created: 2019-04-27T22:51:23.531283+00:00
  • date_released: 2019-09-12
  • doi: 10.17989/ENCSR843UEZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR843UEZ float

Histone_ChIP-seq_ENCSR843UEZ
Histone_ChIP-seq ENCSR843UEZ [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR843UEZ [1.56, 82.3]
n
51,515,227
mean
32.1
sd
17.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 515152271.60% 26679
chr1 5150313 2.07% 2647
chr2 3490138 1.44% 1801
chr3 2895688 1.46% 1451
chr4 2041576 1.07% 1057
chr5 2416910 1.33% 1224
chr6 2877551 1.68% 1470
chr7 2508374 1.57% 1334
chr8 1906236 1.31% 995
chr9 2165215 1.56% 1116
chr10 2156210 1.61% 1131
chr11 2817645 2.09% 1371
chr12 2699640 2.03% 1335
chr13 1030313 0.90% 557
chr14 1675422 1.57% 839
chr15 1662393 1.63% 860
chr16 2063988 2.28% 1078
chr17 3034448 3.64% 1545
chr18 839160 1.04% 466
chr19 3393360 5.79% 1862
chr20 1377741 2.14% 712
chr21 548409 1.17% 288
chr22 1200920 2.36% 635
chrM 13444 81.14% 6
chrX 1495381 0.96% 872
chrY 54752 0.10% 27
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 26679 240 27629 1930.93 1639
global segment-length histogram

Files

Filename Size md5
ENCFF161ERT.bed.gz 762.86 KB 9e1cbbea3dabaee6dc3ec42563f14cf4
ENCFF161ERT.tabix.bed.gz 316.84 KB 7605f8f497a6733771589e1ee7cb4b06
ENCFF161ERT.tabix.bed.gz.tbi 166.23 KB ce21c05a112d1787c469f91ab5cea1e6
genomic_resource.yaml 1.49 KB 5acb9e27787f5b20060db0a17bb7c25d
statistics/