Resource

Id Histone_ChIP-seq/ENCSR842LSTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR842LST [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR842LST
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008953/
  • biosample_summary: Homo sapiens lower lobe of left lung tissue male adult (60 years)
  • date_created: 2020-05-01T02:34:30.576573+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR842LST
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR842LST float

Histone_ChIP-seq_ENCSR842LST
Histone_ChIP-seq ENCSR842LST [biosample_summary="Homo sapiens lower lobe of left lung tissue male adult (60 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR842LST [1.62, 15.5]
n
83,107,916
mean
5.12
sd
2.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 831079162.58% 68141
chr1 8614341 3.46% 7129
chr2 5536766 2.29% 4650
chr3 2861185 1.44% 2445
chr4 2808656 1.48% 2087
chr5 4147596 2.28% 3202
chr6 4368487 2.56% 3192
chr7 3839269 2.41% 3044
chr8 3604273 2.48% 2989
chr9 3536061 2.56% 2842
chr10 4555792 3.40% 3745
chr11 4275410 3.16% 3802
chr12 4401421 3.30% 3591
chr13 1848199 1.62% 1495
chr14 2716265 2.54% 2343
chr15 2811557 2.76% 2495
chr16 2913336 3.22% 2550
chr17 5144846 6.18% 4036
chr18 1359787 1.69% 1211
chr19 4825167 8.23% 3793
chr20 4572032 7.09% 3765
chr21 875168 1.87% 781
chr22 3016630 5.94% 2594
chrX 469130 0.30% 351
chrY 6542 0.01% 9
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 68141 205 62724 1219.65 766
global segment-length histogram

Files

Filename Size md5
ENCFF725NIC.bed.gz 1.26 MB 5f317613155e2d98529d874b4847f919
ENCFF725NIC.tabix.bed.gz 658.84 KB 6661c586e2015252b4507babce56d0c0
ENCFF725NIC.tabix.bed.gz.tbi 165.2 KB 186f6e907c7c9f3da71ee16d7eb0f7ab
genomic_resource.yaml 1.75 KB b76e6b01b58a539f9e41b2ca1daa9d30
statistics/