Resource

Id Histone_ChIP-seq/ENCSR840FCTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR840FCT [biosample_summary="Homo sapiens placenta tissue male embryo" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR840FCT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue male embryo
  • date_created: 2022-05-11T01:54:23.219433+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR840FCT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR840FCT float

Histone_ChIP-seq_ENCSR840FCT
Histone_ChIP-seq ENCSR840FCT [biosample_summary="Homo sapiens placenta tissue male embryo" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR840FCT [1.71, 31.7]
n
49,810,532
mean
7.3
sd
3.63

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 498105321.55% 41149
chr1 5240368 2.10% 4256
chr2 3778754 1.56% 3089
chr3 3206461 1.62% 2732
chr4 1918631 1.01% 1618
chr5 2553216 1.41% 2089
chr6 2970298 1.74% 2396
chr7 2720593 1.71% 2214
chr8 2052091 1.41% 1745
chr9 2253641 1.63% 1811
chr10 2238934 1.67% 1738
chr11 2780395 2.06% 2195
chr12 2370052 1.78% 1988
chr13 1002337 0.88% 889
chr14 1899177 1.77% 1466
chr15 1547799 1.52% 1318
chr16 1665785 1.84% 1421
chr17 2339685 2.81% 1747
chr18 783205 0.97% 696
chr19 2317725 3.95% 1998
chr20 1463543 2.27% 1135
chr21 534397 1.14% 457
chr22 1175356 2.31% 942
chrX 967774 0.62% 1163
chrY 30315 0.05% 46
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41149 220 15015 1210.49 829
global segment-length histogram

Files

Filename Size md5
ENCFF165IMN.bed.gz 955.67 KB 78c76de63516bf334a9119b8dc265711
ENCFF165IMN.tabix.bed.gz 440.45 KB 20d315796198d77d175c038c8720bac1
ENCFF165IMN.tabix.bed.gz.tbi 152.77 KB 1fd15091f671178ac817db68dd86726f
genomic_resource.yaml 1.44 KB bf2b017a8cc56a55d5c8bcdcb79d964a
statistics/