Resource

Id Histone_ChIP-seq/ENCSR837LWLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR837LWL [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR837LWL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:09.105827+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR837LWL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 3 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR837LWL float

Histone_ChIP-seq_ENCSR837LWL
Histone_ChIP-seq ENCSR837LWL [biosample_summary="Homo sapiens BLaER1 3 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR837LWL [1.45, 19.8]
n
223,047,047
mean
6.52
sd
2.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2230470476.93% 185761
chr1 20549637 8.25% 17080
chr1_KI270706v1_random 550 0.31% 2
chr1_KI270713v1_random 7169 17.59% 12
chr1_KI270714v1_random 888 2.13% 3
chr2 17834079 7.36% 14797
chr3 12361462 6.23% 10872
chr3_GL000221v1_random 3488 2.24% 6
chr4 8554426 4.50% 7670
chr4_GL000008v2_random 753 0.36% 2
chr5 11111221 6.12% 9309
chr6 11219839 6.57% 9863
chr7 11108257 6.97% 9651
chr8 10748878 7.41% 8519
chr9 9902596 7.16% 8018
chr10 11771699 8.80% 9525
chr11 10588644 7.84% 8689
chr11_KI270721v1_random 1492 1.49% 4
chr12 9977715 7.49% 8434
chr13 5271852 4.61% 4748
chr14 7432716 6.94% 5942
chr14_GL000009v2_random 1911 0.95% 4
chr14_GL000194v1_random 2033 1.06% 3
chr14_GL000225v1_random 2251 1.07% 2
chr14_KI270723v1_random 411 1.08% 1
chr14_KI270726v1_random 2721 6.22% 7
chr15 7364414 7.22% 6090
chr15_KI270727v1_random 4144 0.92% 6
chr16 9636182 10.67% 7538
chr16_KI270728v1_random 2841 0.15% 5
chr17 12266377 14.73% 9361
chr17_GL000205v2_random 14062 7.58% 14
chr17_KI270729v1_random 1892 0.67% 5
chr18 4716369 5.87% 4021
chr19 8533040 14.56% 7316
chr20 7655602 11.88% 6047
chr21 3449831 7.39% 2737
chr22 6783608 13.35% 4852
chr22_KI270731v1_random 2798 1.86% 7
chr22_KI270733v1_random 3964 2.21% 7
chr22_KI270734v1_random 1260 0.76% 4
chrUn_GL000195v1 2137 1.17% 7
chrUn_GL000214v1 1872 1.36% 5
chrUn_GL000216v2 3128 1.77% 2
chrUn_GL000219v1 10565 5.90% 17
chrUn_GL000220v1 444 0.27% 1
chrUn_GL000224v1 944 0.53% 2
chrUn_KI270438v1 965 0.86% 2
chrUn_KI270442v1 1867 0.48% 3
chrUn_KI270512v1 285 1.26% 1
chrUn_KI270516v1 273 21.00% 1
chrUn_KI270519v1 4609 3.34% 8
chrUn_KI270584v1 1036 22.96% 2
chrUn_KI270742v1 824 0.44% 2
chrUn_KI270744v1 5685 3.37% 7
chrUn_KI270751v1 1442 0.96% 3
chrUn_KI270753v1 2745 4.36% 2
chrUn_KI270755v1 252 0.69% 1
chrX 4109792 2.63% 4515
chrY 5110 0.01% 7
3307 contigs with no values (122090199 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 185761 250 49525 1200.72 740
global segment-length histogram

Files

Filename Size md5
ENCFF165TJF.bed.gz 4.21 MB c1c05dfedc2c4d87de2dfa89c02f0b77
ENCFF165TJF.tabix.bed.gz 1.9 MB 51db1c2a09abc630fe9f5b8c26ff239f
ENCFF165TJF.tabix.bed.gz.tbi 406.16 KB 5e6e461ea124281f5c67dae021fa2c1b
genomic_resource.yaml 3.11 KB 64bd9b7ca1d81e79b46ab566ac338ac3
statistics/