Resource

Id Histone_ChIP-seq/ENCSR836FLXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR836FLX [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR836FLX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo
  • date_created: 2022-05-11T01:53:55.414268+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR836FLX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR836FLX float

Histone_ChIP-seq_ENCSR836FLX
Histone_ChIP-seq ENCSR836FLX [biosample_summary="Homo sapiens placenta tissue female embryo" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR836FLX [1.7, 39.7]
n
27,272,038
mean
14.6
sd
6.93

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 272720380.85% 22513
chr1 2732864 1.10% 2284
chr2 1860822 0.77% 1520
chr3 1549039 0.78% 1239
chr4 1127904 0.59% 895
chr5 1359263 0.75% 1028
chr6 1698604 0.99% 1358
chr7 1410177 0.88% 1182
chr8 986281 0.68% 813
chr9 1100464 0.80% 925
chr10 1102746 0.82% 879
chr11 1470883 1.09% 1204
chr12 1402874 1.05% 1123
chr13 544642 0.48% 454
chr14 893131 0.83% 720
chr15 896507 0.88% 744
chr16 1059439 1.17% 866
chr17 1573608 1.89% 1309
chr18 450981 0.56% 374
chr19 1805190 3.08% 1564
chr20 658162 1.02% 570
chr21 260627 0.56% 222
chr22 561946 1.11% 504
chrX 765884 0.49% 736
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 22513 185 11705 1211.39 1021
global segment-length histogram

Files

Filename Size md5
ENCFF016MVB.bed.gz 565.55 KB 9bf40723c639b5277eef1dccf2d50b82
ENCFF016MVB.tabix.bed.gz 253.43 KB e9a11dbec4ca48cf691eea8017545cf6
ENCFF016MVB.tabix.bed.gz.tbi 141.04 KB d9dbee809a90f541c3469f357d84573d
genomic_resource.yaml 1.45 KB d092db64601b06b031094ad00d283863
statistics/