Resource

Id Histone_ChIP-seq/ENCSR826VJYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR826VJY [biosample_summary="Homo sapiens neutrophil" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR826VJY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000775/
  • biosample_summary: Homo sapiens neutrophil
  • date_created: 2016-11-04T14:32:49.728655+00:00
  • date_released: 2016-11-16
  • doi: 10.17989/ENCSR826VJY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR826VJY float

Histone_ChIP-seq_ENCSR826VJY
Histone_ChIP-seq ENCSR826VJY [biosample_summary="Homo sapiens neutrophil" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR826VJY [1.19, 20.6]
n
134,883,891
mean
6.77
sd
2.98

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1348838914.19% 93676
chr1 13136658 5.28% 9027
chr2 11290113 4.66% 7645
chr3 8989206 4.53% 6350
chr4 5348669 2.81% 3840
chr5 6969510 3.84% 4857
chr6 8090042 4.74% 5642
chr7 6074064 3.81% 4599
chr8 5749951 3.96% 3917
chr9 5716847 4.13% 3901
chr10 6584738 4.92% 4457
chr11 6700117 4.96% 4504
chr12 6996884 5.25% 4938
chr13 2929614 2.56% 2173
chr14 4424474 4.13% 3011
chr15 4892772 4.80% 3304
chr16 4691132 5.19% 3239
chr17 6528668 7.84% 4501
chr18 2342986 2.92% 1711
chr19 5642293 9.63% 3890
chr20 4232415 6.57% 2661
chr21 1776204 3.80% 1134
chr22 2816898 5.54% 1801
chrX 2785808 1.79% 2439
chrY 173828 0.30% 135
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93676 200 38321 1439.9 956
global segment-length histogram

Files

Filename Size md5
ENCFF470MVR.bed.gz 2.21 MB ec90c7f3db28b82f7cb7154c158093d6
ENCFF470MVR.tabix.bed.gz 1006.23 KB da007e2dc377d4f634fdfcb376f1e8af
ENCFF470MVR.tabix.bed.gz.tbi 255.42 KB fd9ad3240862d46942d9335e37acaab9
genomic_resource.yaml 1.87 KB 98c71608cf24f43d87761714a1f660fa
statistics/