Resource

Id Histone_ChIP-seq/ENCSR821VGCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR821VGC [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR821VGC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)
  • date_created: 2018-04-26T17:37:22.786297+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR821VGC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR821VGC float

Histone_ChIP-seq_ENCSR821VGC
Histone_ChIP-seq ENCSR821VGC [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue male adult (37 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR821VGC [1.23, 22.1]
n
65,262,074
mean
4.63
sd
2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 652620742.03% 66743
chr1 4375971 1.76% 4749
chr1_KI270709v1_random 11343 16.97% 14
chr1_KI270712v1_random 1109 0.63% 2
chr2 4708988 1.94% 5434
chr2_KI270716v1_random 7703 5.01% 5
chr3 3843427 1.94% 4340
chr4 3891700 2.05% 4512
chr4_GL000008v2_random 5059 2.41% 2
chr5 4765684 2.63% 4657
chr5_GL000208v1_random 6791 7.33% 11
chr6 3291981 1.93% 3757
chr7 4347847 2.73% 4177
chr8 3393095 2.34% 3713
chr9 2325632 1.68% 2457
chr9_KI270719v1_random 3900 2.21% 5
chr9_KI270720v1_random 2313 5.92% 2
chr10 3512526 2.63% 3396
chr11 3256595 2.41% 3143
chr12 3482603 2.61% 3291
chr13 1629803 1.43% 1986
chr14 1886314 1.76% 2113
chr14_GL000009v2_random 1148 0.57% 3
chr14_GL000194v1_random 2671 1.40% 4
chr14_GL000225v1_random 57208 27.09% 44
chr14_KI270722v1_random 429 0.22% 1
chr14_KI270723v1_random 1160 3.04% 2
chr14_KI270725v1_random 4383 2.54% 6
chr15 1588649 1.56% 1647
chr16 2162795 2.39% 2202
chr16_KI270728v1_random 382 0.02% 1
chr17 1317877 1.58% 1393
chr17_GL000205v2_random 15503 8.35% 16
chr17_KI270729v1_random 110545 39.36% 50
chr17_KI270730v1_random 24842 22.07% 8
chr18 1357883 1.69% 1610
chr19 5292436 9.03% 3044
chr20 1397674 2.17% 1533
chr21 919461 1.97% 917
chr22 795645 1.57% 823
chr22_KI270732v1_random 5018 12.08% 5
chr22_KI270733v1_random 4178 2.32% 9
chr22_KI270735v1_random 9967 23.28% 12
chr22_KI270736v1_random 131529 72.30% 33
chr22_KI270737v1_random 369 0.36% 1
chr22_KI270738v1_random 32217 32.42% 25
chrUn_GL000214v1 1230 0.89% 3
chrUn_GL000216v2 24731 14.00% 20
chrUn_GL000218v1 630 0.39% 1
chrUn_GL000219v1 25557 14.26% 21
chrUn_GL000220v1 593 0.37% 2
chrUn_GL000224v1 15799 8.79% 18
chrUn_KI270320v1 532 12.05% 1
chrUn_KI270429v1 690 50.70% 1
chrUn_KI270435v1 9625 10.35% 10
chrUn_KI270438v1 48856 43.43% 37
chrUn_KI270442v1 144334 36.81% 88
chrUn_KI270448v1 1966 24.60% 2
chrUn_KI270465v1 437 24.63% 1
chrUn_KI270468v1 1616 39.85% 2
chrUn_KI270507v1 282 5.27% 1
chrUn_KI270508v1 853 43.72% 1
chrUn_KI270509v1 712 30.72% 1
chrUn_KI270510v1 369 15.28% 1
chrUn_KI270511v1 907 11.16% 2
chrUn_KI270512v1 2919 12.87% 2
chrUn_KI270516v1 802 61.69% 1
chrUn_KI270517v1 1094 33.63% 1
chrUn_KI270518v1 395 18.07% 1
chrUn_KI270519v1 16674 12.07% 23
chrUn_KI270521v1 456 5.97% 1
chrUn_KI270522v1 1135 20.00% 1
chrUn_KI270538v1 7068 7.74% 12
chrUn_KI270580v1 460 29.62% 1
chrUn_KI270583v1 357 25.50% 1
chrUn_KI270584v1 289 6.40% 1
chrUn_KI270589v1 3031 6.82% 1
chrUn_KI270590v1 2043 43.61% 2
chrUn_KI270591v1 2970 51.24% 4
chrUn_KI270742v1 394 0.21% 1
chrUn_KI270744v1 3317 1.97% 2
chrUn_KI270746v1 885 1.33% 2
chrUn_KI270747v1 1282 0.65% 1
chrUn_KI270749v1 3609 2.27% 3
chrUn_KI270750v1 925 0.62% 2
chrUn_KI270751v1 3121 2.07% 3
chrUn_KI270753v1 464 0.74% 1
chrUn_KI270754v1 729 1.81% 2
chrUn_KI270756v1 8139 10.23% 5
chrUn_KI270757v1 11238 15.77% 11
chrX 735478 0.47% 1029
chrY 188728 0.33% 261
3275 contigs with no values (120750929 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 66743 215 59611 977.81 708
global segment-length histogram

Files

Filename Size md5
ENCFF758HZP.bed.gz 1.33 MB 1b7d7ea14f6d00f09e14c7c2cff281af
ENCFF758HZP.tabix.bed.gz 680.94 KB 5688fcad88d2217394c2cc6b40489ad1
ENCFF758HZP.tabix.bed.gz.tbi 294.3 KB bcac40851df76285f3b4f798feb77b8e
genomic_resource.yaml 1.55 KB e8a841d68c81c52b83610bc0d230c52d
statistics/