Resource

Id Histone_ChIP-seq/ENCSR816HJOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR816HJO [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR816HJO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002171/
  • biosample_summary: Homo sapiens lower lobe of right lung tissue male adult (60 years)
  • date_created: 2022-05-11T01:53:48.183781+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR816HJO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR816HJO float

Histone_ChIP-seq_ENCSR816HJO
Histone_ChIP-seq ENCSR816HJO [biosample_summary="Homo sapiens lower lobe of right lung tissue male adult (60 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR816HJO [1.64, 13.8]
n
131,934,132
mean
4.57
sd
1.52

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1319341324.10% 103834
chr1 13403727 5.38% 10304
chr2 10567911 4.36% 8403
chr3 8842849 4.46% 7024
chr4 4662425 2.45% 4087
chr5 6598658 3.63% 5329
chr6 7452185 4.36% 6190
chr7 5973124 3.75% 4984
chr8 5253738 3.62% 4305
chr9 5958340 4.31% 4621
chr10 6892933 5.15% 5329
chr11 7322569 5.42% 5552
chr12 6653100 4.99% 5214
chr13 2853742 2.50% 2444
chr14 4552601 4.25% 3490
chr15 5007063 4.91% 3791
chr16 5024790 5.56% 3802
chr17 7611049 9.14% 5427
chr18 2301347 2.86% 1997
chr19 5196753 8.87% 3933
chr20 3939259 6.11% 2914
chr21 1506077 3.22% 1228
chr22 3381031 6.65% 2452
chrX 964536 0.62% 994
chrY 14325 0.03% 20
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 103834 235 40582 1270.63 939
global segment-length histogram

Files

Filename Size md5
ENCFF880EPD.bed.gz 2.25 MB c1736e3946eeb9abab6ceed9648cca3a
ENCFF880EPD.tabix.bed.gz 1.06 MB d25ede8ee586af8002f4e2f03d7d1ebe
ENCFF880EPD.tabix.bed.gz.tbi 275.59 KB f1f8093e96841a32519ffb0ebae3f1a4
genomic_resource.yaml 1.54 KB 50e32b9367423934eb7717dda8fcf1e9
statistics/