Resource

Id Histone_ChIP-seq/ENCSR804RMPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR804RMP [biosample_summary="Homo sapiens layer of hippocampus tissue female adult (75 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR804RMP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002305/
  • biosample_summary: Homo sapiens layer of hippocampus tissue female adult (75 years)
  • date_created: 2015-09-15T19:49:16.282325+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR804RMP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR804RMP float

Histone_ChIP-seq_ENCSR804RMP
Histone_ChIP-seq ENCSR804RMP [biosample_summary="Homo sapiens layer of hippocampus tissue female adult (75 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR804RMP [1.91, 12.4]
n
10,481,504
mean
4.81
sd
1.42

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 104815040.33% 27398
chr1 828633 0.33% 2127
chr2 742683 0.31% 1753
chr3 262803 0.13% 744
chr4 364583 0.19% 844
chr5 486746 0.27% 1230
chr6 563470 0.33% 1370
chr7 589399 0.37% 1355
chr8 401811 0.28% 1089
chr9 389796 0.28% 960
chr10 589658 0.44% 1490
chr11 426960 0.32% 1164
chr12 485232 0.36% 1205
chr13 188096 0.16% 511
chr14 341968 0.32% 878
chr15 274549 0.27% 739
chr16 419256 0.46% 1112
chr17 672448 0.81% 1600
chr18 172773 0.21% 496
chr19 514065 0.88% 1345
chr20 431225 0.67% 1167
chr21 122895 0.26% 329
chr22 231341 0.46% 679
chrX 980935 0.63% 3210
chrY 179 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 27398 145 5470 382.56 296
global segment-length histogram

Files

Filename Size md5
ENCFF718SCV.bed.gz 462.57 KB ff35097f808df2c485b4a2b3f005dbbb
ENCFF718SCV.tabix.bed.gz 249.18 KB 4db95b621e41315c3f835fb2792b8ae2
ENCFF718SCV.tabix.bed.gz.tbi 124.51 KB 6d1a782b44e05858a95cd93ec289543d
genomic_resource.yaml 2.04 KB 455b1359c32fd9fce9d362b957eef512
statistics/