Resource

Id Histone_ChIP-seq/ENCSR804MAPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR804MAP [biosample_summary="Homo sapiens HUES64" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR804MAP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0007089/
  • biosample_summary: Homo sapiens HUES64
  • date_created: 2015-09-15T19:51:25.353302+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR804MAP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR804MAP float

Histone_ChIP-seq_ENCSR804MAP
Histone_ChIP-seq ENCSR804MAP [biosample_summary="Homo sapiens HUES64" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR804MAP [1.36, 81.4]
n
44,629,499
mean
11.5
sd
10.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 446294991.39% 65735
chr1 4133493 1.66% 6010
chr2 3284177 1.36% 4859
chr3 2937031 1.48% 4382
chr4 2291979 1.20% 3409
chr5 2522202 1.39% 3588
chr6 2821611 1.65% 3988
chr7 2345349 1.47% 3502
chr8 1855266 1.28% 2853
chr9 1782798 1.29% 2642
chr10 1928768 1.44% 2866
chr11 2233325 1.65% 3276
chr12 2386355 1.79% 3405
chr13 1220665 1.07% 1759
chr14 1322199 1.24% 2006
chr15 1318186 1.29% 1976
chr16 1474679 1.63% 2240
chr17 1898546 2.28% 2838
chr18 987150 1.23% 1493
chr19 1741093 2.97% 2590
chr20 1126147 1.75% 1666
chr21 482767 1.03% 758
chr22 836263 1.65% 1293
chrX 1608672 1.03% 2225
chrY 90778 0.16% 111
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65735 185 14925 678.93 474
global segment-length histogram

Files

Filename Size md5
ENCFF196TWN.bed.gz 1.55 MB efd5fa50421afa52d5badcb383c8bd71
ENCFF196TWN.tabix.bed.gz 708.01 KB 6796433f713efb8d514de3b2867565dd
ENCFF196TWN.tabix.bed.gz.tbi 271.48 KB c013e8170ed0196ee9510b7f79a10d60
genomic_resource.yaml 1.87 KB 73bee7c2805f058060fc2a4678236b65
statistics/