Resource

Id Histone_ChIP-seq/ENCSR801KDKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR801KDK [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR801KDK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (59 years)
  • date_created: 2020-05-01T03:02:03.805317+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR801KDK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR801KDK float

Histone_ChIP-seq_ENCSR801KDK
Histone_ChIP-seq ENCSR801KDK [biosample_summary="Homo sapiens spleen tissue female adult (59 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR801KDK [1.65, 5.84]
n
4,870,075
mean
3.01
sd
0.541

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 48700750.15% 11608
chr1 427210 0.17% 1130
chr2 296520 0.12% 825
chr3 235999 0.12% 632
chr4 137968 0.07% 349
chr5 214762 0.12% 525
chr6 185819 0.11% 476
chr7 199867 0.13% 483
chr8 134431 0.09% 350
chr9 209448 0.15% 508
chr10 168192 0.13% 430
chr11 223978 0.17% 559
chr12 289157 0.22% 687
chr13 69851 0.06% 192
chr14 150706 0.14% 395
chr15 157845 0.15% 402
chr16 232623 0.26% 546
chr17 261038 0.31% 666
chr18 66694 0.08% 178
chr19 889135 1.52% 1458
chr20 112156 0.17% 297
chr21 44709 0.10% 120
chr22 126953 0.25% 310
chrX 35014 0.02% 90
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 11608 195 4979 419.54 342
global segment-length histogram

Files

Filename Size md5
ENCFF593PUF.bed.gz 208.11 KB cb67369208cce073dcfa6c141545b29b
ENCFF593PUF.tabix.bed.gz 114.66 KB 017d0c1a599744f66f7985327be4494c
ENCFF593PUF.tabix.bed.gz.tbi 64.69 KB 1e56bb77118d40eff2fceecaa3c65816
genomic_resource.yaml 1.71 KB 3c07111774ab102b96dec210d1dfad74
statistics/