Resource

Id Histone_ChIP-seq/ENCSR800MYVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR800MYV [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR800MYV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue female child (16 years)
  • date_created: 2021-01-28T22:01:59.108795+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR800MYV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR800MYV float

Histone_ChIP-seq_ENCSR800MYV
Histone_ChIP-seq ENCSR800MYV [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR800MYV [1.7, 10.6]
n
16,511,440
mean
5.12
sd
1.76

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 165114400.51% 14187
chr1 1304140 0.52% 1118
chr2 1263368 0.52% 901
chr3 618522 0.31% 505
chr4 774117 0.41% 562
chr5 989528 0.55% 797
chr6 1115883 0.65% 857
chr7 909771 0.57% 649
chr8 678862 0.47% 527
chr9 690849 0.50% 553
chr10 856098 0.64% 634
chr11 663034 0.49% 548
chr12 744641 0.56% 639
chr13 449705 0.39% 296
chr14 532654 0.50% 395
chr15 491405 0.48% 402
chr16 406833 0.45% 346
chr17 878100 1.05% 719
chr18 265546 0.33% 211
chr19 693952 1.18% 614
chr20 593133 0.92% 501
chr21 135396 0.29% 111
chr22 275393 0.54% 277
chrX 1180510 0.76% 2025
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14187 175 26530 1163.84 682
global segment-length histogram

Files

Filename Size md5
ENCFF364YLP.bed.gz 270.76 KB 73873739295bee2a96be81635a977d16
ENCFF364YLP.tabix.bed.gz 142.4 KB 902795c7905a410ddb1699fd8541d363
ENCFF364YLP.tabix.bed.gz.tbi 68.55 KB ff1a0bcc8439be328f700bf5867715f5
genomic_resource.yaml 1.51 KB 5d6a429121a76e567690dec0bd3a9b72
statistics/