Resource

Id Histone_ChIP-seq/ENCSR796CSHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR796CSH [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR796CSH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000625/
  • biosample_summary: Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)
  • date_created: 2015-09-16T21:42:05.625127+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR796CSH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (21 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR796CSH float

Histone_ChIP-seq_ENCSR796CSH
Histone_ChIP-seq ENCSR796CSH [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (21 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR796CSH [1.62, 128]
n
33,806,278
mean
44.3
sd
27.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 338062781.05% 28201
chr1 3431173 1.38% 2839
chr1_KI270713v1_random 1192 2.93% 3
chr2 2369377 0.98% 1976
chr3 1830348 0.92% 1457
chr4 1185553 0.62% 948
chr5 1524831 0.84% 1144
chr6 2085598 1.22% 1604
chr7 1588883 1.00% 1403
chr8 1127237 0.78% 984
chr9 1282552 0.93% 1123
chr10 1402210 1.05% 1212
chr11 1815281 1.34% 1406
chr12 1834803 1.38% 1439
chr13 702465 0.61% 607
chr14 1300616 1.22% 1026
chr15 1047307 1.03% 879
chr16 1338509 1.48% 1178
chr17 2078482 2.50% 1796
chr17_GL000205v2_random 2203 1.19% 2
chr18 517812 0.64% 478
chr19 2186265 3.73% 1894
chr20 858850 1.33% 786
chr21 343066 0.73% 322
chr22 790670 1.56% 702
chrUn_GL000195v1 206 0.11% 1
chrUn_GL000219v1 3138 1.75% 4
chrX 1111497 0.71% 954
chrY 46154 0.08% 34
3338 contigs with no values (128488655 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 28201 195 14619 1198.76 918
global segment-length histogram

Files

Filename Size md5
ENCFF958QRD.bed.gz 757.41 KB fd95a1287a05d7e7fbd3796d21504fef
ENCFF958QRD.tabix.bed.gz 322.21 KB 5260f4deac713261a73d4e5201822132
ENCFF958QRD.tabix.bed.gz.tbi 151.42 KB 05df08f85adf7674d66fdbd5df201f8e
genomic_resource.yaml 2.02 KB 64933251d464e6e321d70a63de4dd23c
statistics/