Resource

Id Histone_ChIP-seq/ENCSR793QCLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR793QCL [biosample_summary="Homo sapiens breast epithelium tissue female adult (51 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR793QCL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008367/
  • biosample_summary: Homo sapiens breast epithelium tissue female adult (51 years)
  • date_created: 2019-04-27T23:37:36.444395+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR793QCL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR793QCL float

Histone_ChIP-seq_ENCSR793QCL
Histone_ChIP-seq ENCSR793QCL [biosample_summary="Homo sapiens breast epithelium tissue female adult (51 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR793QCL [1.74, 7.02]
n
9,744,251
mean
3.44
sd
0.652

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 97442510.30% 14952
chr1 892092 0.36% 1409
chr2 703945 0.29% 1167
chr3 566447 0.29% 924
chr4 440879 0.23% 815
chr5 518952 0.29% 844
chr6 428017 0.25% 735
chr7 421329 0.26% 652
chr8 319231 0.22% 538
chr9 411290 0.30% 631
chr10 354947 0.27% 568
chr11 496447 0.37% 768
chr12 593372 0.45% 882
chr13 205242 0.18% 387
chr14 328088 0.31% 513
chr15 331445 0.32% 504
chr16 411049 0.46% 565
chr17 465436 0.56% 692
chr18 160782 0.20% 275
chr19 1076443 1.84% 1131
chr20 235892 0.37% 348
chr21 92939 0.20% 157
chr22 204820 0.40% 288
chrX 85167 0.05% 159
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14952 225 7493 651.7 549
global segment-length histogram

Files

Filename Size md5
ENCFF648VTD.bed.gz 276.1 KB 75af665cf2c07e109ea69afb519bfee2
ENCFF648VTD.tabix.bed.gz 149.42 KB f30266e56378821a94cebbdf9a548a6a
ENCFF648VTD.tabix.bed.gz.tbi 91.26 KB 1d4db5fffc12b9e1731dad5959a68cb6
genomic_resource.yaml 1.74 KB 9f68aff490a0820b2a704d00ababad5d
statistics/