Resource

Id Histone_ChIP-seq/ENCSR793LDGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR793LDG [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR793LDG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue female child (16 years)
  • date_created: 2021-01-28T22:01:59.398164+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR793LDG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female child (16 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR793LDG float

Histone_ChIP-seq_ENCSR793LDG
Histone_ChIP-seq ENCSR793LDG [biosample_summary="Homo sapiens left lung tissue female child (16 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR793LDG [1.77, 5.28]
n
1,520,014
mean
3.08
sd
0.452

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 15200140.05% 3310
chr1 170550 0.07% 368
chr2 97005 0.04% 239
chr3 103615 0.05% 230
chr4 45882 0.02% 106
chr5 65902 0.04% 152
chr6 75828 0.04% 172
chr7 53512 0.03% 116
chr8 45683 0.03% 111
chr9 67199 0.05% 139
chr10 61132 0.05% 133
chr11 78519 0.06% 166
chr12 108502 0.08% 224
chr13 22005 0.02% 58
chr14 61466 0.06% 135
chr15 52868 0.05% 115
chr16 64400 0.07% 125
chr17 81715 0.10% 182
chr18 18713 0.02% 44
chr19 144554 0.25% 262
chr20 39063 0.06% 86
chr21 14624 0.03% 35
chr22 30880 0.06% 70
chrX 16397 0.01% 42
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3310 180 2363 459.22 404
global segment-length histogram

Files

Filename Size md5
ENCFF694AIC.bed.gz 65.81 KB 52a5c6b10b58454be4a79f77328386fa
ENCFF694AIC.tabix.bed.gz 34.93 KB d73a7dc023d8c02c636eb620a7f6e246
ENCFF694AIC.tabix.bed.gz.tbi 31.26 KB b49a012e009268ba91e1812edd06a22f
genomic_resource.yaml 1.51 KB 8ceada2008eff3ca71a11f871091929c
statistics/