Resource

Id Histone_ChIP-seq/ENCSR792VLPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR792VLP [biosample_summary="Homo sapiens transverse colon tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR792VLP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001157/
  • biosample_summary: Homo sapiens transverse colon tissue female adult (51 years)
  • date_created: 2018-11-07T17:35:58.637284+00:00
  • date_released: 2018-12-14
  • doi: 10.17989/ENCSR792VLP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR792VLP float

Histone_ChIP-seq_ENCSR792VLP
Histone_ChIP-seq ENCSR792VLP [biosample_summary="Homo sapiens transverse colon tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR792VLP [1.27, 64]
n
132,247,591
mean
12.4
sd
9.98

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1322475914.11% 76104
chr1 13221447 5.31% 7317
chr2 10241378 4.23% 6080
chr3 8028177 4.05% 4773
chr4 5539982 2.91% 3500
chr5 6361497 3.50% 3743
chr6 7004124 4.10% 4302
chr7 6077978 3.81% 3594
chr8 5098477 3.51% 3127
chr9 6340458 4.58% 3549
chr10 6969302 5.21% 3952
chr11 7048606 5.22% 3831
chr12 6830504 5.13% 3817
chr13 2925117 2.56% 1721
chr14 4667797 4.36% 2582
chr15 4587802 4.50% 2648
chr16 5086957 5.63% 2860
chr17 7416236 8.91% 3838
chr18 2417011 3.01% 1537
chr19 5490555 9.37% 2824
chr20 3705785 5.75% 2185
chr21 1641487 3.51% 1000
chr22 3127599 6.15% 1652
chrX 2418540 1.55% 1671
chrY 775 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 76104 225 82123 1737.72 1173
global segment-length histogram

Files

Filename Size md5
ENCFF338KAJ.bed.gz 1.94 MB f9c32df88947228576637d123194b585
ENCFF338KAJ.tabix.bed.gz 854.95 KB 7f22b0e1ffd4fff018f3a7590655023e
ENCFF338KAJ.tabix.bed.gz.tbi 250.36 KB 8ccdd6a743caf97d7709487b844f98e3
genomic_resource.yaml 1.52 KB 2b0c1248b3cf67e9c48431f64c8cf8f0
statistics/