Resource

Id Histone_ChIP-seq/ENCSR792EDGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR792EDG [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR792EDG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001159/
  • biosample_summary: Homo sapiens sigmoid colon tissue female adult (51 years)
  • date_created: 2019-01-28T12:20:04.775093+00:00
  • date_released: 2019-02-11
  • doi: 10.17989/ENCSR792EDG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR792EDG float

Histone_ChIP-seq_ENCSR792EDG
Histone_ChIP-seq ENCSR792EDG [biosample_summary="Homo sapiens sigmoid colon tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR792EDG [1.63, 8.06]
n
3,756,960
mean
3.62
sd
0.879

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 37569600.12% 4823
chr1 183063 0.07% 274
chr2 149343 0.06% 241
chr3 135612 0.07% 197
chr4 190649 0.10% 271
chr5 280378 0.15% 340
chr6 99324 0.06% 162
chr7 186240 0.12% 266
chr8 96140 0.07% 145
chr9 130456 0.09% 175
chr10 156835 0.12% 220
chr11 89508 0.07% 157
chr12 195761 0.15% 249
chr13 44571 0.04% 78
chr14 55647 0.05% 86
chr15 92509 0.09% 110
chr16 143625 0.16% 188
chr17 69836 0.08% 86
chr18 50301 0.06% 84
chr19 1068599 1.82% 977
chr20 40528 0.06% 72
chr21 109739 0.23% 127
chr22 26392 0.05% 48
chrM 13496 81.45% 6
chrX 137335 0.09% 247
chrY 11073 0.02% 17
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 4823 235 12081 778.97 585
global segment-length histogram

Files

Filename Size md5
ENCFF681THQ.bed.gz 102.0 KB be7cf2a5028a859b0a65f3434867f566
ENCFF681THQ.tabix.bed.gz 51.58 KB 3aae44cb591e41e7c0c8a8154ced1ecf
ENCFF681THQ.tabix.bed.gz.tbi 37.04 KB 1430f2c6715238f383b44c4f1d264763
genomic_resource.yaml 1.51 KB 51bdad22b00a88aa2d22744c1d465350
statistics/