Resource

Id Histone_ChIP-seq/ENCSR791KFQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR791KFQ [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR791KFQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006631/
  • biosample_summary: Homo sapiens right atrium auricular region tissue female adult (53 years)
  • date_created: 2017-01-24T04:38:42.233880+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR791KFQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR791KFQ float

Histone_ChIP-seq_ENCSR791KFQ
Histone_ChIP-seq ENCSR791KFQ [biosample_summary="Homo sapiens right atrium auricular region tissue female adult (53 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR791KFQ [1.62, 60.7]
n
34,448,465
mean
24.4
sd
12.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 344484651.07% 23304
chr1 3462369 1.39% 2325
chr2 2332759 0.96% 1528
chr3 2014149 1.02% 1327
chr4 1472262 0.77% 951
chr5 1682337 0.93% 1031
chr6 2000661 1.17% 1297
chr7 1660767 1.04% 1155
chr8 1294172 0.89% 861
chr9 1426834 1.03% 985
chr10 1516991 1.13% 1005
chr11 1865658 1.38% 1245
chr12 1835212 1.38% 1179
chr13 727793 0.64% 482
chr14 1103621 1.03% 738
chr15 1137110 1.11% 761
chr16 1271835 1.41% 906
chr17 1937506 2.33% 1386
chr18 631094 0.79% 402
chr19 2097599 3.58% 1605
chr20 845503 1.31% 582
chr21 332112 0.71% 227
chr22 739368 1.45% 535
chrM 13221 79.79% 8
chrX 1047532 0.67% 783
3342 contigs with no values (186287931 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 23304 185 13994 1478.22 1295
global segment-length histogram

Files

Filename Size md5
ENCFF580SBV.bed.gz 647.73 KB 171a83691b3a9de134e9786e296865a0
ENCFF580SBV.tabix.bed.gz 273.51 KB 3aece3ded6194d6197a2541ef56669de
ENCFF580SBV.tabix.bed.gz.tbi 147.39 KB b7607d30a68ceee50cb4b26d89e8f5d0
genomic_resource.yaml 1.57 KB 9618baa7fff89c8699a45ded2463409c
statistics/