Resource

Id Histone_ChIP-seq/ENCSR786DQBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR786DQB [biosample_summary="Homo sapiens amnion tissue male embryo (16 weeks)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR786DQB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000305/
  • biosample_summary: Homo sapiens amnion tissue male embryo (16 weeks)
  • date_created: 2015-09-15T20:27:30.241023+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR786DQB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR786DQB float

Histone_ChIP-seq_ENCSR786DQB
Histone_ChIP-seq ENCSR786DQB [biosample_summary="Homo sapiens amnion tissue male embryo (16 weeks)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR786DQB [1.79, 14.8]
n
71,221,396
mean
5.43
sd
1.69

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 712213962.21% 65306
chr1 7353058 2.95% 6684
chr2 4554211 1.88% 4715
chr3 3791594 1.91% 3797
chr4 2241266 1.18% 2437
chr5 3153768 1.74% 3210
chr6 2671447 1.56% 2729
chr7 3251881 2.04% 3028
chr8 2134351 1.47% 2157
chr9 3322771 2.40% 2837
chr10 2931555 2.19% 2896
chr11 3881800 2.87% 3418
chr12 4119949 3.09% 3582
chr13 915927 0.80% 1068
chr14 2434769 2.27% 2326
chr15 2526718 2.48% 2507
chr16 3844428 4.26% 3183
chr17 4870516 5.85% 4060
chr18 985784 1.23% 1107
chr19 6373569 10.87% 4459
chr20 2230271 3.46% 1962
chr21 842148 1.80% 783
chr22 2249979 4.43% 1810
chrX 526457 0.34% 537
chrY 13179 0.02% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 65306 220 23778 1090.58 799
global segment-length histogram

Files

Filename Size md5
ENCFF376IXL.bed.gz 1.19 MB 165a5e8319485d00dedeb3b418ce6425
ENCFF376IXL.tabix.bed.gz 634.92 KB b60f2349f9521a1b24d4c63aad2c65a9
ENCFF376IXL.tabix.bed.gz.tbi 131.71 KB 328d54791942af9a4fc1edf799f68705
genomic_resource.yaml 1.99 KB 17cb37eb580c5e3694d2897a22912d0e
statistics/