Resource

Id Histone_ChIP-seq/ENCSR781UXOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR781UXO [biosample_summary="Homo sapiens foreskin keratinocyte male newborn" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR781UXO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_1001606/
  • biosample_summary: Homo sapiens foreskin keratinocyte male newborn
  • date_created: 2015-09-15T20:26:36.926635+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR781UXO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR781UXO float

Histone_ChIP-seq_ENCSR781UXO
Histone_ChIP-seq ENCSR781UXO [biosample_summary="Homo sapiens foreskin keratinocyte male newborn" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR781UXO [1.69, 77]
n
52,330,085
mean
12.5
sd
11.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 523300851.63% 63581
chr1 5357872 2.15% 6728
chr2 3140784 1.30% 4010
chr3 2519688 1.27% 3135
chr4 1462226 0.77% 1728
chr5 1892534 1.04% 2365
chr6 2221748 1.30% 2880
chr7 2395641 1.50% 2932
chr8 1793912 1.24% 2086
chr9 2451346 1.77% 2907
chr10 2048966 1.53% 2622
chr11 3222816 2.39% 3746
chr12 2468229 1.85% 3134
chr13 711869 0.62% 921
chr14 1697417 1.59% 2102
chr15 1617889 1.59% 2123
chr16 2963303 3.28% 3359
chr17 4051840 4.87% 4736
chr18 645194 0.80% 866
chr19 4454458 7.60% 4797
chr20 1526002 2.37% 1979
chr21 561702 1.20% 740
chr22 2050711 4.04% 2466
chrX 1042018 0.67% 1187
chrY 31920 0.06% 32
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 63581 225 14470 823.05 618
global segment-length histogram

Files

Filename Size md5
ENCFF657VAD.bed.gz 1.63 MB e648008f95da6629be99f433a8865e93
ENCFF657VAD.tabix.bed.gz 706.34 KB 46756c0eba05ade32909913ae9fca35a
ENCFF657VAD.tabix.bed.gz.tbi 217.67 KB 21b67ade3ed5cc20783cd78b42ffa54e
genomic_resource.yaml 1.46 KB c1c8727490e01a10fe479eb3fa32ca6b
statistics/