Resource

Id Histone_ChIP-seq/ENCSR779ISJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR779ISJ [biosample_summary="Homo sapiens right lobe of liver tissue female adult (47 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR779ISJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (47 years)
  • date_created: 2022-05-11T01:55:14.016664+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR779ISJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (47 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR779ISJ float

Histone_ChIP-seq_ENCSR779ISJ
Histone_ChIP-seq ENCSR779ISJ [biosample_summary="Homo sapiens right lobe of liver tissue female adult (47 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR779ISJ [1.85, 48.5]
n
64,660,184
mean
9.87
sd
6.16

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 646601842.01% 50466
chr1 6523030 2.62% 4979
chr2 4834496 2.00% 3868
chr3 4054692 2.04% 3107
chr4 2928094 1.54% 2164
chr5 3263138 1.80% 2418
chr6 3647554 2.14% 2848
chr7 3287593 2.06% 2578
chr8 2717084 1.87% 2168
chr9 3104444 2.24% 2343
chr10 3169031 2.37% 2484
chr11 3362199 2.49% 2532
chr12 3298850 2.48% 2523
chr13 1555046 1.36% 1179
chr14 2049819 1.91% 1610
chr15 2212072 2.17% 1677
chr16 2538705 2.81% 2039
chr17 3088940 3.71% 2497
chr18 1366006 1.70% 1076
chr19 2574753 4.39% 2140
chr20 1666970 2.59% 1307
chr21 643110 1.38% 537
chr22 1567493 3.08% 1206
chrX 1207065 0.77% 1186
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 50466 210 20734 1281.26 893
global segment-length histogram

Files

Filename Size md5
ENCFF271HJI.bed.gz 1.23 MB 5525f73d86778ea0ae7e92a2ced85357
ENCFF271HJI.tabix.bed.gz 556.49 KB 9b764139829d2aec3e09d4cdf4ca7440
ENCFF271HJI.tabix.bed.gz.tbi 200.24 KB 31b4e1ebe6838d60e808d52883024d38
genomic_resource.yaml 1.53 KB 2ceda6d25129564f3e1f4973293665e5
statistics/