Resource

Id Histone_ChIP-seq/ENCSR778QHGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR778QHG [biosample_summary="Homo sapiens tibial nerve tissue female adult (51 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR778QHG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue female adult (51 years)
  • date_created: 2018-10-31T03:12:33.925960+00:00
  • date_released: 2018-12-11
  • doi: 10.17989/ENCSR778QHG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR778QHG float

Histone_ChIP-seq_ENCSR778QHG
Histone_ChIP-seq ENCSR778QHG [biosample_summary="Homo sapiens tibial nerve tissue female adult (51 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR778QHG [1.41, 36.8]
n
42,265,513
mean
7.75
sd
4.55

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 422655131.31% 33092
chr1 4362441 1.75% 3253
chr1_KI270713v1_random 661 1.62% 1
chr2 3016830 1.25% 2420
chr3 2525419 1.27% 2036
chr4 1414330 0.74% 1204
chr5 1944049 1.07% 1512
chr6 2145761 1.26% 1729
chr7 1931363 1.21% 1590
chr8 1584816 1.09% 1281
chr9 1995071 1.44% 1497
chr10 2332061 1.74% 1733
chr11 2434684 1.80% 1838
chr12 2172175 1.63% 1651
chr13 976739 0.85% 783
chr14 1382283 1.29% 1069
chr15 1410147 1.38% 1142
chr16 1438391 1.59% 1202
chr17 2645655 3.18% 1991
chr18 715090 0.89% 588
chr19 2154236 3.68% 1639
chr20 1180811 1.83% 925
chr21 480788 1.03% 408
chr22 1227456 2.42% 868
chrUn_GL000219v1 1077 0.60% 1
chrUn_KI270467v1 1278 32.60% 2
chrX 791901 0.51% 729
3340 contigs with no values (186080637 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 33092 220 30841 1277.21 925
global segment-length histogram

Files

Filename Size md5
ENCFF115GLO.bed.gz 797.19 KB bc6427b4d505c2fb4a6fcfb5808bb399
ENCFF115GLO.tabix.bed.gz 364.2 KB 76fc0fcdf4634ca588f611a8dddf0f8d
ENCFF115GLO.tabix.bed.gz.tbi 153.05 KB a1fa8fd91ccfea4943ee0387440d8860
genomic_resource.yaml 1.51 KB c14dc7b55753e32dcaebf10462249970
statistics/