Resource

Id Histone_ChIP-seq/ENCSR775NSLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR775NSL [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR775NSL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (41 years)
  • date_created: 2020-05-01T01:12:41.148693+00:00
  • date_released: 2020-09-10
  • doi: 10.17989/ENCSR775NSL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR775NSL float

Histone_ChIP-seq_ENCSR775NSL
Histone_ChIP-seq ENCSR775NSL [biosample_summary="Homo sapiens adrenal gland tissue female adult (41 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR775NSL [1.99, 14]
n
14,277,847
mean
6.37
sd
1.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 142778470.44% 15405
chr1 1427034 0.57% 1531
chr2 1051207 0.43% 1060
chr3 860873 0.43% 896
chr4 594103 0.31% 626
chr5 701276 0.39% 706
chr6 838721 0.49% 862
chr7 690989 0.43% 762
chr8 549157 0.38% 591
chr9 588267 0.43% 632
chr10 625229 0.47% 656
chr11 784781 0.58% 840
chr12 785610 0.59% 807
chr13 291931 0.26% 313
chr14 478609 0.45% 526
chr15 471527 0.46% 518
chr16 559107 0.62% 633
chr17 797547 0.96% 881
chr18 258288 0.32% 284
chr19 861059 1.47% 1019
chr20 352918 0.55% 382
chr21 133318 0.29% 143
chr22 300501 0.59% 357
chrX 275795 0.18% 380
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 15405 210 6735 926.83 823
global segment-length histogram

Files

Filename Size md5
ENCFF134AKC.bed.gz 346.67 KB 3d661878865026b9929d02efa6758b6e
ENCFF134AKC.tabix.bed.gz 165.44 KB 6f797fea1e35cf1ae49713a4d64c37ea
ENCFF134AKC.tabix.bed.gz.tbi 105.11 KB 95fb738a3ac2c353d4d8518de1f03f55
genomic_resource.yaml 1.51 KB f9086ae52feb44824f2c0a160bcf2fbd
statistics/