Resource

Id Histone_ChIP-seq/ENCSR773PIUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR773PIU [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR773PIU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0006920/
  • biosample_summary: Homo sapiens esophagus squamous epithelium tissue female adult (51 years)
  • date_created: 2017-12-06T21:16:59.696044+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR773PIU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR773PIU float

Histone_ChIP-seq_ENCSR773PIU
Histone_ChIP-seq ENCSR773PIU [biosample_summary="Homo sapiens esophagus squamous epithelium tissue female adult (51 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR773PIU [1.25, 61.4]
n
43,863,175
mean
24.7
sd
13.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 438631751.36% 24729
chr1 4444858 1.79% 2472
chr2 2972700 1.23% 1648
chr3 2446774 1.23% 1373
chr4 1777278 0.93% 973
chr5 1976449 1.09% 1058
chr6 2525498 1.48% 1397
chr7 2101261 1.32% 1197
chr8 1599691 1.10% 924
chr9 1828877 1.32% 1047
chr10 1851287 1.38% 1064
chr11 2391632 1.77% 1291
chr12 2334590 1.75% 1268
chr13 898790 0.79% 507
chr14 1453512 1.36% 789
chr15 1433494 1.41% 796
chr16 1726300 1.91% 1015
chr17 2635517 3.17% 1476
chr18 740684 0.92% 425
chr19 2827926 4.82% 1711
chr20 1139007 1.77% 667
chr21 481158 1.03% 263
chr22 997393 1.96% 592
chrM 1870 11.29% 3
chrX 1275318 0.82% 771
chrY 1311 <0.01% 2
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 24729 232 22843 1773.75 1558
global segment-length histogram

Files

Filename Size md5
ENCFF659VMQ.bed.gz 708.37 KB 4c4540ece31453df2509c7b058cffdb6
ENCFF659VMQ.tabix.bed.gz 293.19 KB 08ca0ee7890dc67d1c888b2dca21b242
ENCFF659VMQ.tabix.bed.gz.tbi 159.83 KB 6f64c84b1b2ebc7793ddb7aa116f9d43
genomic_resource.yaml 1.57 KB 38923e4ad8f43b5df9c90b3cebf1239e
statistics/