Resource

Id Histone_ChIP-seq/ENCSR771YJTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR771YJT [biosample_summary="Homo sapiens tibial nerve tissue female adult (53 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR771YJT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue female adult (53 years)
  • date_created: 2017-01-24T04:31:04.462991+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR771YJT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR771YJT float

Histone_ChIP-seq_ENCSR771YJT
Histone_ChIP-seq ENCSR771YJT [biosample_summary="Homo sapiens tibial nerve tissue female adult (53 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR771YJT [1.51, 55.2]
n
135,518,559
mean
11
sd
7.77

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1355185594.21% 93300
chr1 13388375 5.38% 8777
chr2 10416589 4.30% 7283
chr3 8836546 4.46% 6090
chr4 5348636 2.81% 4062
chr5 7121806 3.92% 5124
chr6 7468617 4.37% 5432
chr7 6604925 4.15% 4753
chr8 5784814 3.99% 4216
chr9 6159172 4.45% 4206
chr10 7462095 5.58% 4878
chr11 7664274 5.67% 5012
chr12 6768765 5.08% 4690
chr13 3356213 2.93% 2312
chr14 4665410 4.36% 3113
chr15 4798692 4.71% 3287
chr16 4221488 4.67% 3016
chr17 7096097 8.52% 4364
chr18 2493384 3.10% 1881
chr19 4997890 8.53% 3153
chr20 3447465 5.35% 2385
chr21 1691221 3.62% 1197
chr22 3206471 6.31% 1952
chrX 2519614 1.61% 2117
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93300 200 65742 1452.5 875
global segment-length histogram

Files

Filename Size md5
ENCFF221LDE.bed.gz 2.12 MB dd77ed59bcce054cb0af19e13f19e693
ENCFF221LDE.tabix.bed.gz 994.87 KB db84e1d51fa1c9327b06f92275edd726
ENCFF221LDE.tabix.bed.gz.tbi 258.52 KB cc7b19425dc9ad4d803523830f4e685e
genomic_resource.yaml 1.51 KB 08568c895c38951dcb7d19fd6abc60df
statistics/