Resource

Id Histone_ChIP-seq/ENCSR769FOCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR769FOC [biosample_summary="Homo sapiens PC-9" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR769FOC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0002847/
  • biosample_summary: Homo sapiens PC-9
  • date_created: 2014-10-24T16:22:31.107325+00:00
  • date_released: 2016-05-06
  • doi: 10.17989/ENCSR769FOC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR769FOC float

Histone_ChIP-seq_ENCSR769FOC
Histone_ChIP-seq ENCSR769FOC [biosample_summary="Homo sapiens PC-9" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR769FOC [1.59, 78.8]
n
89,536,868
mean
14.5
sd
11.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 895368682.78% 58799
chr1 9461180 3.80% 5976
chr2 7508527 3.10% 4940
chr3 5969164 3.01% 3962
chr4 3358682 1.77% 2378
chr5 4719994 2.60% 3121
chr6 5568564 3.26% 3589
chr7 4484612 2.81% 2950
chr8 4143590 2.85% 2646
chr9 3502363 2.53% 2351
chr10 4128280 3.09% 2711
chr11 4775291 3.53% 3039
chr12 4553572 3.42% 2898
chr13 1953359 1.71% 1306
chr14 2983146 2.79% 1969
chr15 2900501 2.84% 1921
chr16 2765847 3.06% 1927
chr17 4128384 4.96% 2753
chr18 1892959 2.36% 1239
chr19 2880376 4.91% 2060
chr20 3000065 4.66% 1754
chr21 863169 1.85% 567
chr22 1813442 3.57% 1165
chrX 2181801 1.40% 1577
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58799 230 28779 1522.76 1064
global segment-length histogram

Files

Filename Size md5
ENCFF371BKL.bed.gz 1.56 MB ed9050dbff038f527cab822bb4218442
ENCFF371BKL.tabix.bed.gz 668.39 KB 47a55dae293d90e3feeb89872321610e
ENCFF371BKL.tabix.bed.gz.tbi 223.33 KB 0600947601ca4568a89cb0bc5a774ae6
genomic_resource.yaml 1.58 KB a04edceb3174e9f03aaf29718b914763
statistics/