Resource

Id Histone_ChIP-seq/ENCSR768JEDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR768JED [biosample_summary="Homo sapiens OCI-LY1" and target="H3K9me2"]
Description
Labels
  • accession: ENCSR768JED
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0005907/
  • biosample_summary: Homo sapiens OCI-LY1
  • date_created: 2014-02-20T05:42:05.107485+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR768JED
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment: Cross-correlation metrics are too poor to permit further analysis.
  • target: H3K9me2

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR768JED float

Histone_ChIP-seq_ENCSR768JED

Histone_ChIP-seq ENCSR768JED [biosample_summary="Homo sapiens OCI-LY1" and target="H3K9me2"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR768JED [1.67, 4.22]
n
557,466
mean
2.59
sd
0.295

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5574660.02% 1632
chr1 10091 <0.01% 33
chr2 13951 0.01% 45
chr3 89476 0.05% 260
chr4 12703 0.01% 43
chr5 13124 0.01% 43
chr6 8048 <0.01% 28
chr7 154385 0.10% 427
chr8 144167 0.10% 409
chr9 4739 <0.01% 14
chr10 3711 <0.01% 13
chr11 5651 <0.01% 19
chr12 4866 <0.01% 17
chr13 68632 0.06% 207
chr14 4761 <0.01% 17
chr15 3901 <0.01% 12
chr16 2199 <0.01% 5
chr17 1200 <0.01% 4
chr18 6626 0.01% 21
chr19 867 <0.01% 2
chr20 374 <0.01% 1
chr21 3227 0.01% 9
chr22 516 <0.01% 2
chrX 251 <0.01% 1
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1632 208 1060 341.58 305
global segment-length histogram

Files

Filename Size md5
ENCFF241SEE.bed.gz 32.75 KB 1023c8fc19805ccc8a7326ddd4972014
ENCFF241SEE.tabix.bed.gz 17.42 KB 7a02d25a19072be3141e50ce9066529f
ENCFF241SEE.tabix.bed.gz.tbi 19.05 KB e867637904e2c65aeb32a14e1698c90a
genomic_resource.yaml 3.47 KB ebfb89153fef95ddf699bffa50431825
statistics/