Resource

Id Histone_ChIP-seq/ENCSR767WVZcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR767WVZ [biosample_summary="Homo sapiens chorion tissue male embryo (16 weeks)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR767WVZ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003124/
  • biosample_summary: Homo sapiens chorion tissue male embryo (16 weeks)
  • date_created: 2015-09-15T20:27:43.978869+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR767WVZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR767WVZ float

Histone_ChIP-seq_ENCSR767WVZ
Histone_ChIP-seq ENCSR767WVZ [biosample_summary="Homo sapiens chorion tissue male embryo (16 weeks)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR767WVZ [1.84, 16.1]
n
94,161,089
mean
5.51
sd
1.72

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 941610892.93% 100411
chr1 10660650 4.28% 10988
chr2 7233953 2.99% 7823
chr3 6181448 3.12% 6675
chr4 3374087 1.77% 4002
chr5 4730171 2.61% 5287
chr6 4942124 2.89% 5643
chr7 4183898 2.63% 4748
chr8 4044731 2.79% 4377
chr9 4581869 3.31% 4636
chr10 4675705 3.49% 5005
chr11 5587740 4.14% 5504
chr12 4170576 3.13% 4678
chr13 1968120 1.72% 2292
chr14 3261302 3.05% 3348
chr15 3165269 3.10% 3338
chr16 3466490 3.84% 3444
chr17 4917816 5.91% 4845
chr18 1628844 2.03% 1886
chr19 4256403 7.26% 4359
chr20 2851878 4.43% 2912
chr21 1252341 2.68% 1406
chr22 2462656 4.85% 2366
chrX 541652 0.35% 815
chrY 21366 0.04% 34
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100411 210 15782 937.76 741
global segment-length histogram

Files

Filename Size md5
ENCFF363DOP.bed.gz 1.86 MB cec627b279b66cc206fd1268b441a717
ENCFF363DOP.tabix.bed.gz 982.16 KB 3ab187c0fad66da6d4b94d5ded9d611d
ENCFF363DOP.tabix.bed.gz.tbi 262.92 KB 9844d600e11dcef8c0bdc3808462bc10
genomic_resource.yaml 1.99 KB ad5c72857c0c909c43c7d4134e3d5457
statistics/