Resource

Id Histone_ChIP-seq/ENCSR767NPVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR767NPV [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR767NPV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007106/
  • biosample_summary: Homo sapiens chorionic villus tissue male embryo (16 weeks)
  • date_created: 2017-03-22T16:16:52.320861+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR767NPV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR767NPV float

Histone_ChIP-seq_ENCSR767NPV
Histone_ChIP-seq ENCSR767NPV [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR767NPV [1.92, 32.2]
n
6,638,070
mean
4.37
sd
0.971

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 66380700.21% 16677
chr1 196943 0.08% 514
chr2 426753 0.18% 1110
chr3 291160 0.15% 787
chr4 396186 0.21% 1020
chr5 451463 0.25% 1106
chr6 207819 0.12% 541
chr7 578133 0.36% 1317
chr8 540717 0.37% 1356
chr9 202885 0.15% 521
chr10 331862 0.25% 843
chr11 279118 0.21% 734
chr12 348829 0.26% 883
chr13 324240 0.28% 860
chr14 220959 0.21% 590
chr15 217236 0.21% 483
chr16 303433 0.34% 768
chr17 116258 0.14% 283
chr18 323693 0.40% 839
chr19 326644 0.56% 715
chr20 107289 0.17% 302
chr21 238541 0.51% 582
chr22 149005 0.29% 364
chrX 40210 0.03% 118
chrY 18694 0.03% 41
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 16677 150 4012 398.04 344
global segment-length histogram

Files

Filename Size md5
ENCFF373FHK.bed.gz 303.46 KB 7fae538687b263983921c6acd7571f47
ENCFF373FHK.tabix.bed.gz 162.42 KB 6707f1747d76769b59abf3325a630364
ENCFF373FHK.tabix.bed.gz.tbi 99.05 KB 52e48ea524c9ca96574bca6a2f7dfc14
genomic_resource.yaml 1.52 KB 7fd3454f09a38393be755252ba11bdc5
statistics/