Resource

Id Histone_ChIP-seq/ENCSR763VEJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR763VEJ [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR763VEJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:51.753117+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR763VEJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR763VEJ float

Histone_ChIP-seq_ENCSR763VEJ
Histone_ChIP-seq ENCSR763VEJ [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR763VEJ [1.58, 98.4]
n
84,625,362
mean
23.6
sd
21.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 846253622.63% 57296
chr1 8215774 3.30% 5535
chr2 5420488 2.24% 3796
chr3 4344620 2.19% 2989
chr4 2723989 1.43% 1895
chr5 3710104 2.04% 2462
chr6 4202884 2.46% 2882
chr7 3756585 2.36% 2659
chr8 3350114 2.31% 2335
chr9 3658073 2.64% 2527
chr10 3704560 2.77% 2462
chr11 4537380 3.36% 2986
chr12 4439705 3.33% 2928
chr13 1533351 1.34% 1064
chr14 2689962 2.51% 1769
chr15 2694802 2.64% 1797
chr16 4168836 4.61% 2914
chr17 5838295 7.01% 3785
chr18 1281727 1.59% 859
chr19 6136445 10.47% 3972
chr20 2768952 4.30% 1889
chr21 952802 2.04% 685
chr22 2473834 4.87% 1748
chrX 2022080 1.30% 1358
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 57296 218 27040 1476.99 963
global segment-length histogram

Files

Filename Size md5
ENCFF028YZS.bed.gz 1.49 MB 19c46f38785d94c6b2402ec179de871b
ENCFF028YZS.tabix.bed.gz 646.65 KB b78843a362687a4ffb0c09f4c534de49
ENCFF028YZS.tabix.bed.gz.tbi 207.42 KB cfc5bd0665133100be1d35cd49567d37
genomic_resource.yaml 2.31 KB e71cd3bd7ca1489e32d8c84935ff7b5c
statistics/