Resource

Id Histone_ChIP-seq/ENCSR759RTYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR759RTY [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR759RTY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue female adult (53 years)
  • date_created: 2017-12-06T21:07:42.798642+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR759RTY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR759RTY float

Histone_ChIP-seq_ENCSR759RTY
Histone_ChIP-seq ENCSR759RTY [biosample_summary="Homo sapiens upper lobe of left lung tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR759RTY [1.31, 8.02]
n
16,862,288
mean
2.96
sd
0.946

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 168622880.52% 13121
chr1 1025312 0.41% 906
chr2 935161 0.39% 901
chr3 808376 0.41% 756
chr4 788303 0.41% 647
chr5 1210504 0.67% 963
chr6 669224 0.39% 656
chr7 1007663 0.63% 827
chr8 685273 0.47% 646
chr9 597932 0.43% 483
chr10 731816 0.55% 600
chr11 678153 0.50% 641
chr12 869320 0.65% 649
chr13 296145 0.26% 284
chr14 382189 0.36% 376
chr15 470117 0.46% 379
chr16 477182 0.53% 332
chr17 230438 0.28% 194
chr18 256729 0.32% 252
chr19 3404789 5.81% 1385
chr20 206088 0.32% 202
chr21 225460 0.48% 176
chr22 139954 0.28% 132
chrX 761186 0.49% 727
chrY 4974 0.01% 7
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 13121 425 41247 1285.14 908
global segment-length histogram

Files

Filename Size md5
ENCFF332QCK.bed.gz 264.67 KB 5e8f7f77982c3d2b3a8d3de3766b1bf5
ENCFF332QCK.tabix.bed.gz 141.89 KB e6359021cebc9da17726ef59146e2620
ENCFF332QCK.tabix.bed.gz.tbi 90.14 KB e0b28b058fddf1d0e34e0a6097559a15
genomic_resource.yaml 1.55 KB 60e4a746a8da8500551260ecd91f14b9
statistics/