type: position_score
table:
  filename: ENCFF428WVA.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR758OEC
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR758OEC [biosample_summary="Homo sapiens MM.1S" and target="H3K27ac"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR758OEC [biosample_summary="Homo sapiens MM.1S" and target="H3K27ac"]'
  description: "**status**: released\n\n**biological\\_replicates**: Rep 1, Rep 2\n\
    \n**summary**: \n\n**output\\_type**: replicated peaks\n\n**audit\\_internal\\\
    _action**: Archived analysis {ENCAN773BPG|/analyses/ENCAN773BPG/} has in progress\
    \ subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}\n\
    \n**audit\\_warning**: PBC1 (PCR Bottlenecking Coefficient 1, M1/M\\_distinct)\
    \ is the ratio of the number of genomic locations where exactly one read maps\
    \ uniquely (M1) to the number of genomic locations where some reads map (M\\_distinct).\
    \ A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate\
    \ bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking.\
    \ PBC1 value > 0.9 is recommended, but > 0.8 is acceptable. ENCODE processed alignments\
    \ file {ENCFF014EKJ|/files/ENCFF014EKJ/} processed by ChIP-seq ENCODE3 hg19 pipeline\
    \ was generated from a library with PBC1 value of 0.88."
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR758OEC
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: ''
    biosample_summary: Homo sapiens MM.1S
    replication_type: isogenic
    biosample_ontology: /biosample-types/cell_line_EFO_0005724/
    perturbed: false
    doi: 10.17989/ENCSR758OEC
    date_created: '2014-10-24T16:22:34.112051+00:00'
    date_released: '2016-05-06'
    submitter_comment: ''
    target: H3K27ac